Locus |
Common name |
Short description |
AT1G69120 |
AGL7, AP1 |
APETALA1, AGAMOUS-like 7, K-box region and MADS-box transcription factor family protein (.1) |
>AT1G69120.1 CDS map
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Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HpaII, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AatII
| GACGT|C |
256 |
AciI
| C|CGC |
415, 599, 762 |
AflII
| C|TTAAG |
292, 406 |
AluI
| AG|CT |
73, 91, 234, 306, 369, 390, 456 |
AlwNI
| CAGNNN|CTG |
379 |
ApoI
| Pu|AATTPy |
530 |
BanII
| GPuGCPy|C |
360, 457, 539 |
BfaI
| C|TAG |
420 |
BglII
| A|GATCT |
101 |
BsaHI
| GPu|CGPyC |
256 |
BsaJI
| C|CNNGG |
570, 750 |
BsiHKAI
| G[AT]GC[AT]|C |
457 |
BslI
| CCNNNNN|NNGG |
467 |
Bsp1286I
| G[GAT]GC[CAT]|C |
360, 457, 539 |
BspHI
| T|CATGA |
96 |
BsrDI
| GCAATGNN| |
357, 699 |
BsrI
| ACTGGN| |
269 |
BstBI
| TT|CGAA |
163 |
BstYI
| Pu|GATCPy |
101 |
BtsI
| GCAGTGNN| |
554 |
Cac8I
| GCN|NGC |
351, 497 |
DdeI
| C|TNAG |
247, 298, 534 |
DpnI
| GA-CH3|TC |
40, 100, 511, 557, 686, 710 |
DpnII
| |GATC |
40, 100, 511, 557, 686, 710 |
Fnu4HI
| GC|NGC |
386, 602, 754, 762 |
HaeIII
| GG|CC |
475, 572 |
HinfI
| G|ANTC |
177, 249, 377, 444, 722 |
Hpy188I
| TCN|GA |
252, 374 |
Hpy99I
| CG[AT]CG| |
254 |
HpyCH4IV
| A|CGT |
255 |
HpyCH4V
| TG|CA |
241, 348, 743 |
MboI
| |GATC |
40, 100, 511, 557, 686, 710 |
MfeI
| C|AATTG |
19 |
MseI
| T|TAA |
291, 405 |
MwoI
| GCNNNNN|NNGC |
126, 602, 751 |
N.BstNBI
| GAGTCNNNN|N |
254, 449 |
NlaIII
| CATG| |
95, 496, 628, 661, 765 |
NspI
| PuCATG|Py |
497, 629 |
RsaI
| GT|AC |
214, 439 |
SacI
| GAGCT|C |
457 |
Sau3AI
| |GATC |
40, 100, 511, 557, 686, 710 |
SmlI
| C|TPyPuAG |
292, 406 |
SphI
| GCATG|C |
497 |
StyI
| C|C[AT][AT]GG |
570, 750 |
Taqƒ¿I
| T|CGA |
62, 162, 272, 714 |
TfiI
| G|A[AT]TC |
177, 377 |
TseI
| G|C[AT]GC |
386, 602, 754 |
Tsp45I
| |GT[CG]AC |
54 |
Tsp509I
| |AATT |
18, 529 |
TspRI
| NNCA[CG]TGNN| |
175, 400, 554 |
XmnI
| GAANN|NNTTC |
530 |
Click here to view TAIR data
>AT1G69120.1 length:771
ATGGGAAGGG GTAGGGTTCA ATTGAAGAGG ATAGAGAACA AGATCAATAG | 50 |
ACAAGTGACA TTCTCGAAAA GAAGAGCTGG TCTTTTGAAG AAAGCTCATG | 100 |
AGATCTCTGT TCTCTGTGAT GCTGAAGTTG CTCTTGTTGT CTTCTCCCAT | 150 |
AAGGGAAAAC TCTTCGAATA CTCCACTGAT TCTTGTATGG AGAAGATACT | 200 |
TGAACGCTAT GAGAGGTACT CTTACGCCGA AAGACAGCTT ATTGCACCTG | 250 |
AGTCCGACGT CAATACAAAC TGGTCGATGG AGTATAACAG GCTTAAGGCT | 300 |
AAGATTGAGC TTTTGGAGAG AAACCAGAGG CATTATCTTG GGGAAGACTT | 350 |
GCAAGCAATG AGCCCTAAAG AGCTTCAGAA TCTGGAGCAG CAGCTTGACA | 400 |
CTGCTCTTAA GCACATCCGC ACTAGAAAAA ACCAACTTAT GTACGAGTCC | 450 |
ATCAATGAGC TCCAAAAAAA GGAGAAGGCC ATACAGGAGC AAAACAGCAT | 500 |
GCTTTCTAAA CAGATCAAGG AGAGGGAAAA AATTCTTAGG GCTCAACAGG | 550 |
AGCAGTGGGA TCAGCAGAAC CAAGGCCACA ATATGCCTCC CCCTCTGCCA | 600 |
CCGCAGCAGC ACCAAATCCA GCATCCTTAC ATGCTCTCTC ATCAGCCATC | 650 |
TCCTTTTCTC AACATGGGTG GTCTGTATCA AGAAGATGAT CCTATGGCAA | 700 |
TGAGGAGGAA TGATCTCGAA CTGACTCTTG AACCCGTTTA CAACTGCAAC | 750 |
CTTGGCTGCT TCGCCGCATG A | 800 |
>AT1G69120.1 longest ORF length:256
MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALVVFSH | 50 |
KGKLFEYSTD SCMEKILERY ERYSYAERQL IAPESDVNTN WSMEYNRLKA | 100 |
KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES | 150 |
INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP | 200 |
PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN | 250 |
LGCFAA | 300 |
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