fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G69120 AGL7, AP1 APETALA1, AGAMOUS-like 7, K-box region and MADS-box transcription factor family protein (.1)

>AT1G69120.1 CDS map

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Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HindIII, HpaI, HpaII, HphI, HpyCH4III, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MspI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacII, SalI, SapI, Sau96I, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AatII GACGT|C 256
AciI C|CGC 415, 599, 762
AflII C|TTAAG 292, 406
AluI AG|CT 73, 91, 234, 306, 369, 390, 456
AlwNI CAGNNN|CTG 379
ApoI Pu|AATTPy 530
BanII GPuGCPy|C 360, 457, 539
BfaI C|TAG 420
BglII A|GATCT 101
BsaHI GPu|CGPyC 256
BsaJI C|CNNGG 570, 750
BsiHKAI G[AT]GC[AT]|C 457
BslI CCNNNNN|NNGG 467
Bsp1286I G[GAT]GC[CAT]|C 360, 457, 539
BspHI T|CATGA 96
BsrDI GCAATGNN| 357, 699
BsrI ACTGGN| 269
BstBI TT|CGAA 163
BstYI Pu|GATCPy 101
BtsI GCAGTGNN| 554
Cac8I GCN|NGC 351, 497
DdeI C|TNAG 247, 298, 534
DpnI GA-CH3|TC 40, 100, 511, 557, 686, 710
DpnII |GATC 40, 100, 511, 557, 686, 710
Fnu4HI GC|NGC 386, 602, 754, 762
HaeIII GG|CC 475, 572
HinfI G|ANTC 177, 249, 377, 444, 722
Hpy188I TCN|GA 252, 374
Hpy99I CG[AT]CG| 254
HpyCH4IV A|CGT 255
HpyCH4V TG|CA 241, 348, 743
MboI |GATC 40, 100, 511, 557, 686, 710
MfeI C|AATTG 19
MseI T|TAA 291, 405
MwoI GCNNNNN|NNGC 126, 602, 751
N.BstNBI GAGTCNNNN|N 254, 449
NlaIII CATG| 95, 496, 628, 661, 765
NspI PuCATG|Py 497, 629
RsaI GT|AC 214, 439
SacI GAGCT|C 457
Sau3AI |GATC 40, 100, 511, 557, 686, 710
SmlI C|TPyPuAG 292, 406
SphI GCATG|C 497
StyI C|C[AT][AT]GG 570, 750
Taqƒ¿I T|CGA 62, 162, 272, 714
TfiI G|A[AT]TC 177, 377
TseI G|C[AT]GC 386, 602, 754
Tsp45I |GT[CG]AC 54
Tsp509I |AATT 18, 529
TspRI NNCA[CG]TGNN| 175, 400, 554
XmnI GAANN|NNTTC 530


Click here to view TAIR data

>AT1G69120.1 length:771
ATGGGAAGGG GTAGGGTTCA ATTGAAGAGG ATAGAGAACA AGATCAATAG 
50
ACAAGTGACA TTCTCGAAAA GAAGAGCTGG TCTTTTGAAG AAAGCTCATG 
100
AGATCTCTGT TCTCTGTGAT GCTGAAGTTG CTCTTGTTGT CTTCTCCCAT 
150
AAGGGAAAAC TCTTCGAATA CTCCACTGAT TCTTGTATGG AGAAGATACT 
200
TGAACGCTAT GAGAGGTACT CTTACGCCGA AAGACAGCTT ATTGCACCTG 
250
AGTCCGACGT CAATACAAAC TGGTCGATGG AGTATAACAG GCTTAAGGCT 
300
AAGATTGAGC TTTTGGAGAG AAACCAGAGG CATTATCTTG GGGAAGACTT 
350
GCAAGCAATG AGCCCTAAAG AGCTTCAGAA TCTGGAGCAG CAGCTTGACA 
400
CTGCTCTTAA GCACATCCGC ACTAGAAAAA ACCAACTTAT GTACGAGTCC 
450
ATCAATGAGC TCCAAAAAAA GGAGAAGGCC ATACAGGAGC AAAACAGCAT 
500
GCTTTCTAAA CAGATCAAGG AGAGGGAAAA AATTCTTAGG GCTCAACAGG 
550
AGCAGTGGGA TCAGCAGAAC CAAGGCCACA ATATGCCTCC CCCTCTGCCA 
600
CCGCAGCAGC ACCAAATCCA GCATCCTTAC ATGCTCTCTC ATCAGCCATC 
650
TCCTTTTCTC AACATGGGTG GTCTGTATCA AGAAGATGAT CCTATGGCAA 
700
TGAGGAGGAA TGATCTCGAA CTGACTCTTG AACCCGTTTA CAACTGCAAC 
750
CTTGGCTGCT TCGCCGCATG A
800

>AT1G69120.1 longest ORF length:256
MGRGRVQLKR IENKINRQVT FSKRRAGLLK KAHEISVLCD AEVALVVFSH 
50
KGKLFEYSTD SCMEKILERY ERYSYAERQL IAPESDVNTN WSMEYNRLKA 
100
KIELLERNQR HYLGEDLQAM SPKELQNLEQ QLDTALKHIR TRKNQLMYES 
150
INELQKKEKA IQEQNSMLSK QIKEREKILR AQQEQWDQQN QGHNMPPPLP 
200
PQQHQIQHPY MLSHQPSPFL NMGGLYQEDD PMAMRRNDLE LTLEPVYNCN 
250
LGCFAA
300