fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G69170 SPL6 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein (.1)

>AT1G69170.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI
Name Recognition sequence Cut positions
EcoRI G|AATTC 672
HindIII A|AGCTT 625
SacI GAGCT|C 399
XbaI T|CTAGA 304
XhoI C|TCGAG 335


Click here to view TAIR data

>AT1G69170.1 length:1218
ATGGATTCTT GGAGCTACGG GAGAAGCGTT TTCATGTCAA ATGAAACTCT 
50
TTTACCTTGT GATACTTTTG CTAAGAATAG AAGATTTGAA CAGAGACTCT 
100
CTAATAATGA TGATGTGTTG ATTTCTGACA TGGCTGGTAA CTCCAATGGA 
150
TTCAGTGCTG TTTCTATTAC TAAAGTTGTT CCTGAAGAGG AAGATGAGGA 
200
GAACATATCT TCTTCTTCAA AGTTCTCTAG TCAGGAATTG AATAGGATAG 
250
ATTTCAAACT TAGGAGCTTT TTGGATTTAG GAAATGATGA TGATGATACA 
300
TCCTCTAGAG GTTTTGCTCT GCCATCTAAA AAGTCTCGAG CTTCAAACTT 
350
GTGCTCTCAG AATCCCTTGT GTCAAGTTTA TGGGTGTAGT AAGGATCTGA 
400
GCTCTTCGAA AGATTACCAC AAAAGGCATA GAGTTTGCGA GGCTCATTCG 
450
AAAACTTCTG TGGTCATAGT TAATGGTCTT GAACAGAGGT TTTGTCAACA 
500
GTGCAGCAGG TTTCATTTCC TCTCAGAGTT TGATGATGGC AAAAGAAGTT 
550
GCAGAAGGCG ATTAGCCGGT CACAATGAAC GAAGAAGGAA ACCTGCATTC 
600
TATTTCCTAC CGGGTAAGCG CCATAAGCTT CTTCGCACCT CTCAAGATGT 
650
AGTAGGCAAC AAGTTTCTGG AGAATTCATC ATTGGTATTG CCAGAGTCAT 
700
TTCCTGGTAG TCTCTTATAC AGAGTAATAG ATGAAGACGA CCACCGTACA 
750
AGTAGACTCG TGAGTTTCAA AGATGAACCT ACTTGTTCCA TGTTTCCTAC 
800
TAATGAGCAA AACAGCAGCA GAACTTATGA ATCTAAACCA GCAATTTATT 
850
CCACGGAAGT ATCCTCCATT TGGGACTTAC ATGAGACGGC GGCATCACGC 
900
TCTACTCGTG CTCTCTCTCT TCTGTCAGCT CAGTCCCAAC AACACTTGTC 
950
TAAGTTTCCA AACACAACGT TCTCAATCAC CCAACCCAAC CAAAATCTCA 
1000
ATCACTCATC ATCAACTGAC TATCATCAGA TGGAACAACC GTTGTGGATC 
1050
GATCCTGGCA AGACCAATTC TGCTGGTTCT AGTTCTTGTA AAGGAAAAGG 
1100
AACATCCACG GTTGATCTAC TGCAACTGTC ATCACATCTT CAAAGAATCG 
1150
AGCAACAGAG GAATTACACT GGTGATGTGA AGCAGGAATA TAATGAGCTT 
1200
TATTTCCCTG GCTCCTAA
1250

>AT1G69170.1 longest ORF length:405
MDSWSYGRSV FMSNETLLPC DTFAKNRRFE QRLSNNDDVL ISDMAGNSNG 
50
FSAVSITKVV PEEEDEENIS SSSKFSSQEL NRIDFKLRSF LDLGNDDDDT 
100
SSRGFALPSK KSRASNLCSQ NPLCQVYGCS KDLSSSKDYH KRHRVCEAHS 
150
KTSVVIVNGL EQRFCQQCSR FHFLSEFDDG KRSCRRRLAG HNERRRKPAF 
200
YFLPGKRHKL LRTSQDVVGN KFLENSSLVL PESFPGSLLY RVIDEDDHRT 
250
SRLVSFKDEP TCSMFPTNEQ NSSRTYESKP AIYSTEVSSI WDLHETAASR 
300
STRALSLLSA QSQQHLSKFP NTTFSITQPN QNLNHSSSTD YHQMEQPLWI 
350
DPGKTNSAGS SSCKGKGTST VDLLQLSSHL QRIEQQRNYT GDVKQEYNEL 
400
YFPGS
450