fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G69180 CRC CRABS CLAW, Plant-specific transcription factor YABBY family protein (.1)

>AT1G69180.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 431
NcoI C|CATGG 516
StyI C|C[AT][AT]GG 516


Click here to view TAIR data

>AT1G69180.1 length:546
ATGAACCTAG AAGAGAAACC AACCATGACG GCTTCAAGGG CTTCCCCTCA 
50
AGCCGAACAT CTCTACTACG TCCGGTGTAG CATCTGCAAC ACCATCCTCG 
100
CGGTTGGGAT ACCATTGAAG AGAATGCTTG ACACGGTAAC GGTGAAATGC 
150
GGCCATTGTG GTAACCTCTC GTTTCTCACC ACAACTCCTC CTCTTCAAGG 
200
CCATGTTAGC CTCACCCTTC AGATGCAGAG CTTTGGTGGA AGTGACTATA 
250
AGAAGGGAAG CTCTTCTTCT TCCTCTTCCT CCACCTCCAG CGACCAGCCC 
300
CCATCTCCCT CACCTCCCTT TGTCGTCAAA CCTCCTGAGA AGAAGCAGAG 
350
GCTCCCATCT GCATACAACC GCTTCATGAG GGATGAGATC CAACGCATCA 
400
AAAGTGCCAA TCCGGAAATA CCACACCGTG AAGCTTTCAG TGCTGCTGCC 
450
AAAAATTGGG CTAAGTACAT ACCCAACTCT CCTACTTCCA TTACTTCCGG 
500
AGGCCACAAC ATGATCCATG GCTTGGGATT CGGTGAGAAG AAGTGA
550

>AT1G69180.1 longest ORF length:181
MNLEEKPTMT ASRASPQAEH LYYVRCSICN TILAVGIPLK RMLDTVTVKC 
50
GHCGNLSFLT TTPPLQGHVS LTLQMQSFGG SDYKKGSSSS SSSSTSSDQP 
100
PSPSPPFVVK PPEKKQRLPS AYNRFMRDEI QRIKSANPEI PHREAFSAAA 
150
KNWAKYIPNS PTSITSGGHN MIHGLGFGEK K
200