fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G69490 NAP, ANAC029, ATNAP Arabidopsis NAC domain containing protein 29, NAC-like, activated by AP3/PI (.1)

>AT1G69490.1 CDS map

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Uncut enzymes: Acc65I, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstEII, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DdeI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoRI, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, MwoI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PshAI, PsiI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, Tsp45I, TspRI, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AatII GACGT|C 606
AccI GT|[AC][TG]AC 350
AflIII A|CPuPyGT 628
AgeI A|CCGGT 277
AluI AG|CT 250, 328, 495
ApoI Pu|AATTPy 142
AvaI C|PyCGPuG 163
AvaII G|G[AT]CC 666, 743
BfaI C|TAG 207, 332, 729
BglII A|GATCT 767
BsaAI PyAC|GTPu 410
BsaHI GPu|CGPyC 606
BsaJI C|CNNGG 31, 151, 622
BsaWI [AT]|CCGG[AT] 259, 277
BslI CCNNNNN|NNGG 265, 360
BsoBI C|PyCGPuG 163
BsrFI Pu|CCGGPy 277
BsrI ACTGGN| 377
BssKI |CCNGG 30, 245
BstBI TT|CGAA 80
BstF5I GGATGNN| 544
BstNI CC|[AT]GG 30
BstYI Pu|GATCPy 767
BtgI C|CPuPyGG 151
Cac8I GCN|NGC 636
Cfr10I [AG]|CCGG[TC] 277
DpnI GA-CH3|TC 379, 701, 766
DpnII |GATC 379, 701, 766
EcoNI CCTNN|NNNAGG 360
EcoO109I PuG|GNCCPy 667, 744
EcoRV GAT|ATC 133
Fnu4HI GC|NGC 249
HincII GTPy|PuAC 562
HindIII A|AGCTT 496
HinfI G|ANTC 232, 364, 405, 720, 726
HpaI GTT|AAC 562
HpaII C|CGG 244, 258, 276
Hpy188I TCN|GA 37, 235, 500, 723
Hpy99I CG[AT]CG| 53, 607
HpyCH4III ACN|GT 433, 461
HpyCH4IV A|CGT 312, 409, 427, 605, 626
HpyCH4V TG|CA 384
MboI |GATC 379, 701, 766
MseI T|TAA 561, 753, 770, 795
MspA1I C[AC]G|C[GT]G 251, 300
MspI C|CGG 244, 258, 276
N.BstNBI GAGTCNNNN|N 237, 731
NciI CC|[CG]GG 245
NcoI C|CATGG 151
NlaIII CATG| 91, 102, 150, 382, 386, 401, 439, 520, 661
NlaIV GGN|NCC 436, 666, 743
NsiI ATGCA|T 385
PflFI GACN|NNGTC 93
PpuMI PuG|G[AT]CCPy 667, 744
PspGI |CC[AT]GG 30
PvuII CAG|CTG 251
RsaI GT|AC 279, 458, 530
Sau3AI |GATC 379, 701, 766
Sau96I G|GNCC 666, 743
ScaI AGT|ACT 531
ScrFI CC|NGG 30, 245
StyI C|C[AT][AT]GG 151, 622
Taqƒ¿I T|CGA 79, 144, 608, 699
TfiI G|A[AT]TC 364, 405, 720
TseI G|C[AT]GC 249
Tsp509I |AATT 141, 156, 686
Tth111I GACN|NNGTC 93


Click here to view TAIR data

>AT1G69490.1 length:807
ATGGAAGTAA CTTCCCAATC TACCCTCCCT CCAGGGTTCA GATTTCATCC 
50
TACCGACGAA GAACTCATCG TTTACTATCT TCGAAACCAG ACCATGTCTA 
100
AACCATGCCC TGTCTCCATC ATCCCAGAAG TTGATATCTA CAAATTCGAC 
150
CCATGGCAAT TACCCGAGAA AACAGAGTTT GGAGAAAATG AGTGGTATTT 
200
CTTCAGCCCT AGAGAAAGAA AATATCCAAA CGGAGTCAGA CCAAACCGGG 
250
CAGCTGTTTC CGGTTATTGG AAAGCAACCG GTACAGACAA AGCCATTCAC 
300
AGCGGTTCAA GTAACGTAGG TGTCAAGAAA GCTCTAGTCT TCTACAAAGG 
350
TAGACCTCCT AAAGGAATCA AAACTGACTG GATCATGCAT GAGTATCGTC 
400
TCCATGATTC ACGTAAAGCA TCAACGAAAC GTAACGGTTC CATGAGGTTA 
450
GATGAATGGG TACTGTGTAG GATATACAAG AAGAGAGGAG CAAGTAAGCT 
500
TCTGAATGAG CAAGAGGGTT TCATGGACGA AGTACTAATG GAGGATGAGA 
550
CAAAAGTTGT AGTTAACGAA GCAGAGAGAA GAACTGAAGA AGAGATAATG 
600
ATGATGACGT CGATGAAACT TCCAAGGACG TGTTCGCTGG CTCATTTGTT 
650
GGAAATGGAT TACATGGGAC CCGTCTCTCA CATTGATAAT TTTAGTCAGT 
700
TCGATCATCT TCATCAACCT GATTCGGAGT CTAGTTGGTT CGGGGACCTT 
750
CAGTTTAACC AAGACGAGAT CTTAAACCAT CATCGTCAAG CGATGTTTAA 
800
GTTTTAG
850

>AT1G69490.1 longest ORF length:268
MEVTSQSTLP PGFRFHPTDE ELIVYYLRNQ TMSKPCPVSI IPEVDIYKFD 
50
PWQLPEKTEF GENEWYFFSP RERKYPNGVR PNRAAVSGYW KATGTDKAIH 
100
SGSSNVGVKK ALVFYKGRPP KGIKTDWIMH EYRLHDSRKA STKRNGSMRL 
150
DEWVLCRIYK KRGASKLLNE QEGFMDEVLM EDETKVVVNE AERRTEEEIM 
200
MMTSMKLPRT CSLAHLLEMD YMGPVSHIDN FSQFDHLHQP DSESSWFGDL 
250
QFNQDEILNH HRQAMFKF
300