Locus |
Common name |
Short description |
AT1G69570 |
AtDof1,10 |
Dof-type zinc finger DNA-binding family protein (.1) |
>AT1G69570.1 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AccIII(BspMII), AflII, AflIII, AgeI, AhdI, AlwI, ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstBI, BstEII, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MslI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PleI, PmeI, PmlI, PshAI, PsiI, PspGI, PspOMI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, SwaI, TliI, TspRI, Tth111I, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
1136 |
AciI
| C|CGC |
749 |
AclI
| AA|CGTT |
520 |
AfeI
| AGC|GCT |
1012 |
AluI
| AG|CT |
387, 499, 728, 1000, 1109, 1165 |
AlwNI
| CAGNNN|CTG |
266, 480, 662 |
Aor51HI(Eco47III)
| AGC|GCT |
1012 |
ApoI
| Pu|AATTPy |
214, 427 |
AvaI
| C|PyCGPuG |
615, 1042 |
AvaII
| G|G[AT]CC |
168, 807 |
BclI
| T|GATCA |
306 |
BfaI
| C|TAG |
9, 402, 816, 1002, 1161 |
BsaJI
| C|CNNGG |
735, 781 |
BsaWI
| [AT]|CCGG[AT] |
183, 381 |
BslI
| CCNNNNN|NNGG |
165, 841 |
BsoBI
| C|PyCGPuG |
615, 1042 |
BsrI
| ACTGGN| |
664, 842 |
BstAPI
| GCANNNN|NTGC |
1149 |
BstF5I
| GGATGNN| |
557, 848 |
BstYI
| Pu|GATCPy |
222, 508 |
Cac8I
| GCN|NGC |
1187 |
DdeI
| C|TNAG |
268, 533, 592, 627, 872, 974, 984, 1024 |
DpnI
| GA-CH3|TC |
74, 113, 221, 239, 305, 319, 507, 622, 908 |
DpnII
| |GATC |
74, 113, 221, 239, 305, 319, 507, 622, 908 |
EcoO109I
| PuG|GNCCPy |
808 |
Fnu4HI
| GC|NGC |
1152 |
HaeII
| PuGCGC|Py |
1012 |
HaeIII
| GG|CC |
558, 783 |
HhaI
| GCG|C |
414, 1011 |
HinP1I
| G|CGC |
414, 1011 |
HindIII
| A|AGCTT |
388 |
HinfI
| G|ANTC |
129, 645, 705, 797, 925, 978, 1060 |
HpaII
| C|CGG |
182, 380 |
Hpy188I
| TCN|GA |
111, 237, 267, 485, 591, 642, 857, 873, 975, 1119 |
Hpy99I
| CG[AT]CG| |
79, 540 |
HpyCH4III
| ACN|GT |
301, 481, 852, 899, 1132 |
HpyCH4IV
| A|CGT |
450, 463, 519 |
HpyCH4V
| TG|CA |
473, 579, 848, 1150, 1188 |
MboI
| |GATC |
74, 113, 221, 239, 305, 319, 507, 622, 908 |
MseI
| T|TAA |
186 |
MspA1I
| C[AC]G|C[GT]G |
500 |
MspI
| C|CGG |
182, 380 |
MwoI
| GCNNNNN|NNGC |
1149 |
N.BstNBI
| GAGTCNNNN|N |
650, 802 |
NlaIII
| CATG| |
396, 885, 1186 |
NlaIV
| GGN|NCC |
180, 807, 855 |
NspI
| PuCATG|Py |
1187 |
PflMI
| CCANNNN|NTGG |
165 |
PpuMI
| PuG|G[AT]CCPy |
808 |
PstI
| CTGCA|G |
474, 1151 |
PvuII
| CAG|CTG |
500 |
RsaI
| GT|AC |
342 |
Sau3AI
| |GATC |
74, 113, 221, 239, 305, 319, 507, 622, 908 |
Sau96I
| G|GNCC |
168, 807 |
ScaI
| AGT|ACT |
343 |
SfcI
| C|TPuPyAG |
474, 1151 |
SmlI
| C|TPyPuAG |
373, 716 |
SphI
| GCATG|C |
1187 |
StyI
| C|C[AT][AT]GG |
735, 781 |
Taqƒ¿I
| T|CGA |
996 |
TfiI
| G|A[AT]TC |
129, 705, 925, 978, 1060 |
TseI
| G|C[AT]GC |
1152 |
Tsp45I
| |GT[CG]AC |
585 |
Tsp509I
| |AATT |
65, 213, 426, 770 |
XbaI
| T|CTAGA |
10, 1162 |
Click here to view TAIR data
>AT1G69570.1 length:1200
ATGTCTAAAT CTAGAGATAC GGAGATAAAG TTGTTTGGGA GGACAATCAC | 50 |
ATCTCTTTTA GATGTGAATT GTTATGATCC GTCGTCGTTG TCCCCTGTTC | 100 |
ACGATGTTTC TTCTGATCCA AGCAAGGAGG ATTCGTCTTC TTCTTCATCT | 150 |
TCTTGTTCTC CAACTATTGG ACCAATCAGG GTTCCGGTTA AAAAAAGTGA | 200 |
GCAAGAGAGT AACAAATTCA AAGATCCATA TATATTATCC GATCTAAACG | 250 |
AACCACCAAA AGCAGTATCT GAGATTTCAT CACCAAGAAG TTCCAAGAAC | 300 |
AACTGTGATC AACAGAGCGA GATCACAACA ACAACTACCA CAAGTACTAC | 350 |
ATCAGGAGAG AAATCAACGG CTCTCAAGAA ACCGGACAAG CTTATTCCAT | 400 |
GTCCTAGATG TGAAAGCGCA AACACCAAAT TCTGTTATTA CAACAACTAC | 450 |
AACGTGAACC AGCCACGTTA CTTCTGCAGG AACTGTCAGA GGTATTGGAC | 500 |
AGCTGGTGGA TCTATGAGGA ACGTTCCTGT TGGCTCAGGT CGTCGCAAGA | 550 |
ACAAAGGATG GCCTTCTTCA AACCATTACT TGCAAGTCAC TTCTGAGGAT | 600 |
TGTGATAATA ATAACTCGGG GACGATCCTT AGTTTCGGTT CTTCGGAGTC | 650 |
TTCGGTTACA GAGACTGGTA AGCATCAGTC AGGTGATACA GCAAAGATAA | 700 |
GTGCTGATTC AGTTTCTCAA GAAAATAAAA GCTACCAAGG GTTTCTTCCT | 750 |
CCGCAAGTAA TGTTACCTAA TAATTCTTCT CCTTGGCCTT ACCAATGGAG | 800 |
TCCAACGGGT CCTAACGCTA GTTTCTACCC TGTCCCCTTC TACTGGGGAT | 850 |
GCACGGTTCC GATATACCCT ACCTCAGAGA CTTCATCATG TTTAGGAAAA | 900 |
CGGTCAAGAG ATCAAACTGA AGGAAGAATC AATGATACTA ATACAACAAT | 950 |
AACTACTACA AGAGCAAGAT TGGTCTCAGA ATCTCTTAGA ATGAATATCG | 1000 |
AAGCTAGTAA GAGCGCTGTG TGGTCTAAGT TACCGACAAA ACCCGAGAAA | 1050 |
AAAACGCAAG GATTCAGTTT GTTCAATGGA TTTGACACAA AGGGAAACAG | 1100 |
CAACAGAAGT AGCTTGGTCT CCGAAACTTC TCACAGTCTA CAAGCAAACC | 1150 |
CTGCAGCGAT GTCTAGAGCT ATGAACTTCA GGGAGAGCAT GCAACAATAA | 1200 |
>AT1G69570.1 longest ORF length:399
MSKSRDTEIK LFGRTITSLL DVNCYDPSSL SPVHDVSSDP SKEDSSSSSS | 50 |
SCSPTIGPIR VPVKKSEQES NKFKDPYILS DLNEPPKAVS EISSPRSSKN | 100 |
NCDQQSEITT TTTTSTTSGE KSTALKKPDK LIPCPRCESA NTKFCYYNNY | 150 |
NVNQPRYFCR NCQRYWTAGG SMRNVPVGSG RRKNKGWPSS NHYLQVTSED | 200 |
CDNNNSGTIL SFGSSESSVT ETGKHQSGDT AKISADSVSQ ENKSYQGFLP | 250 |
PQVMLPNNSS PWPYQWSPTG PNASFYPVPF YWGCTVPIYP TSETSSCLGK | 300 |
RSRDQTEGRI NDTNTTITTT RARLVSESLR MNIEASKSAV WSKLPTKPEK | 350 |
KTQGFSLFNG FDTKGNSNRS SLVSETSHSL QANPAAMSRA MNFRESMQQ | 400 |
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