fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G69580 Homeodomain-like superfamily protein (.1.2)

>AT1G69580.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, SalI, SmaI, SpeI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 351
PacI TTAAT|TAA 1006
PstI CTGCA|G 363
PvuII CAG|CTG 727
SacI GAGCT|C 598, 747
StyI C|C[AT][AT]GG 103
XbaI T|CTAGA 604


Click here to view TAIR data

>AT1G69580.1 length:1011
ATGTGTTTAT TAATGGAGAT CAACAATAAT GCCAACAATA CTAATACTAC 
50
TATTGATAAT CACAAGGCAA AGATGAGCCT TGTGTTGTCA ACGGATGCTA 
100
AGCCAAGGTT GAAATGGACT TGTGATCTTC ATCACAAATT CATCGAAGCC 
150
GTTAATCAAC TTGGAGGACC TAACAAAGCA ACACCTAAGG GTTTGATGAA 
200
GGTTATGGAG ATTCCTGGGC TTACCTTATA CCATCTCAAG AGCCATTTAC 
250
AGAAATATCG GTTAGGGAAG AGCATGAAGT TCGATGATAA CAAGCTAGAA 
300
GTTTCCTCTG CATCAGAGAA TCAAGAAGTT GAGAGTAAAA ACGATTCAAG 
350
AGATCTCCGA GGCTGCAGTG TCACCGAAGA AAACAGCAAT CCAGCTAAAG 
400
AAGGGCTACA AATCACAGAG GCTTTACAAA TGCAGATGGA AGTTCAGAAG 
450
AAACTTCATG AACAAATCGA AGTTCAGAGG CATTTGCAGG TGAAGATTGA 
500
GGCACAAGGA AAGTATCTAC AGTCCGTTTT AATGAAAGCT CAACAAACTC 
550
TCGCTGGCTA CTCATCTTCA AATCTCGGCA TGGATTTTGC GAGGACCGAG 
600
CTCTCTAGAT TAGCTTCAAT GGTGAACAGA GGCTGTCCAA GCACTTCGTT 
650
CTCAGAGCTA ACGCAAGTAG AAGAAGAAGA AGAAGGTTTC TTGTGGTACA 
700
AGAAACCAGA AAACAGAGGA ATTAGTCAGC TGAGATGTTC AGTAGAGAGC 
750
TCGTTGACAT CTTCAGAGAC CTCAGAGACA AAACTGGATA CTGACAATAA 
800
CCTTAATAAA TCGATTGAAC TTCCGTTGAT GGAGATCAAC TCGGAAGTGA 
850
TGAAGGGGAA GAAGAGAAGC ATAAACGACG TCGTTTGCGT GGAGCAGCCT 
900
CTAATGAAGA GAGCTTTTGG AGTTGATGAT GATGAGCATT TGAAGTTGAG 
950
TTTGAATACT TACAAGAAAG ACATGGAGGC GTGTACGAAC ATAGGACTAG 
1000
GGTTTAATTA A
1050

>AT1G69580.1 longest ORF length:336
MCLLMEINNN ANNTNTTIDN HKAKMSLVLS TDAKPRLKWT CDLHHKFIEA 
50
VNQLGGPNKA TPKGLMKVME IPGLTLYHLK SHLQKYRLGK SMKFDDNKLE 
100
VSSASENQEV ESKNDSRDLR GCSVTEENSN PAKEGLQITE ALQMQMEVQK 
150
KLHEQIEVQR HLQVKIEAQG KYLQSVLMKA QQTLAGYSSS NLGMDFARTE 
200
LSRLASMVNR GCPSTSFSEL TQVEEEEEGF LWYKKPENRG ISQLRCSVES 
250
SLTSSETSET KLDTDNNLNK SIELPLMEIN SEVMKGKKRS INDVVCVEQP 
300
LMKRAFGVDD DEHLKLSLNT YKKDMEACTN IGLGFN
350