|
|
|
|
|
|
|
|
| Locus | Common name | Short description |
| AT1G70510 | ATK1, KNAT2 | ARABIDOPSIS THALIANA KN 1, KNOTTED-like from Arabidopsis thaliana 2 (.1) |
>AT1G70510.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, Aor51HI(Eco47III), ApaI, AscI, AseI, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrFI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstNI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cac8I, Cfr10I, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoO109I, EcoRV, FauI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PleI, PmeI, PmlI, PpuMI, PshAI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, Tsp45I, Tth111I, XbaI, XcmI, XmaI
| Name | Recognition sequence | Cut positions |
| AccII(FnuDII) | CG|CG | 162, 617 |
| AciI | C|CGC | 19, 138, 161, 616 |
| AluI | AG|CT | 175, 367, 378, 486, 523, 633, 705 |
| AlwNI | CAGNNN|CTG | 515 |
| ApaLI | G|TGCAC | 501 |
| ApoI | Pu|AATTPy | 388, 646 |
| AvaI | C|PyCGPuG | 676 |
| AvaII | G|G[AT]CC | 507, 629 |
| BamHI | G|GATCC | 121 |
| BsaJI | C|CNNGG | 149 |
| BsaWI | [AT]|CCGG[AT] | 97 |
| BsiHKAI | G[AT]GC[AT]|C | 501 |
| BslI | CCNNNNN|NNGG | 26, 272, 777 |
| BsoBI | C|PyCGPuG | 676 |
| Bsp1286I | G[GAT]GC[CAT]|C | 501 |
| BspDI | AT|CGAT | 259 |
| BsrDI | GCAATGNN| | 613 |
| BsrGI | T|GTACA | 332 |
| BsrI | ACTGGN| | 505 |
| BstBI | TT|CGAA | 170 |
| BstF5I | GGATGNN| | 592 |
| BstUI | CG|CG | 162, 617 |
| BstYI | Pu|GATCPy | 121 |
| ClaI | AT|CGAT | 259 |
| DdeI | C|TNAG | 178, 195, 376, 564 |
| DpnI | GA-CH3|TC | 120, 371, 431, 620, 815 |
| DpnII | |GATC | 120, 371, 431, 620, 815 |
| EcoNI | CCTNN|NNNAGG | 777 |
| EcoRI | G|AATTC | 388 |
| Fnu4HI | GC|NGC | 485, 585 |
| HaeII | PuGCGC|Py | 279 |
| HaeIII | GG|CC | 441, 762 |
| HhaI | GCG|C | 278 |
| HinP1I | G|CGC | 278 |
| HinfI | G|ANTC | 311, 903 |
| HpaII | C|CGG | 96 |
| Hpy188I | TCN|GA | 39, 66, 123, 150, 491, 531, 552, 623, 873 |
| Hpy99I | CG[AT]CG| | 25, 49, 125, 449 |
| HpyCH4III | ACN|GT | 113, 403 |
| HpyCH4IV | A|CGT | 50 |
| HpyCH4V | TG|CA | 483, 500 |
| MboI | |GATC | 120, 371, 431, 620, 815 |
| MfeI | C|AATTG | 834 |
| MseI | T|TAA | 417 |
| MspA1I | C[AC]G|C[GT]G | 587 |
| MspI | C|CGG | 96 |
| MwoI | GCNNNNN|NNGC | 616, 726 |
| NlaIII | CATG| | 326, 391, 880 |
| NlaIV | GGN|NCC | 121 |
| NspI | PuCATG|Py | 881 |
| PaeR7I | C|TCGAG | 676 |
| PflMI | CCANNNN|NTGG | 272 |
| PsiI | TTA|TAA | 842 |
| RsaI | GT|AC | 331 |
| Sau3AI | |GATC | 120, 371, 431, 620, 815 |
| Sau96I | G|GNCC | 507, 629 |
| SfcI | C|TPuPyAG | 521 |
| SmlI | C|TPyPuAG | 676 |
| Taq��I | T|CGA | 23, 169, 258, 447, 675, 735 |
| TfiI | G|A[AT]TC | 311, 903 |
| TliI | C|TCGAG | 676 |
| TseI | G|C[AT]GC | 485, 585 |
| Tsp509I | |AATT | 185, 387, 645, 833 |
| TspRI | NNCA[CG]TGNN| | 505 |
| XhoI | C|TCGAG | 676 |
| XmnI | GAANN|NNTTC | 311 |
Click here to view TAIR data
>AT1G70510.1 length:933
ATGGATAGAA TGTGTGGTTT CCGCTCGACG GAAGACTATT CGGAGAAAGC | 50 |
GACGTTGATG ATGCCGTCCG ATTATCAGTC TTTGATTTGT TCAACCACCG | 100 |
GAGACAATCA AAGACTGTTT GGATCCGACG AACTCGCTAC CGCTTTGTCC | 150 |
TCGGAGTTGC TTCCGCGTAT TCGAAAAGCT GAGGATAATT TCTCTCTTAG | 200 |
TGTCATCAAA TCCAAAATCG CTTCTCATCC TTTGTATCCT CGCTTACTCC | 250 |
AAACCTACAT CGATTGCCAA AAGGTGGGAG CGCCTATGGA AATAGCGTGT | 300 |
ATATTGGAAG AGATTCAGCG AGAGAACCAT GTGTACAAGA GAGATGTTGC | 350 |
TCCATTATCT TGCTTTGGAG CTGATCCTGA GCTTGATGAA TTCATGGAAA | 400 |
CCTACTGTGA TATATTGGTT AAATACAAAA CCGATCTTGC GAGGCCGTTC | 450 |
GACGAGGCTA CAACTTTCAT AAACAAGATT GAAATGCAGC TTCAGAACTT | 500 |
GTGCACTGGT CCAGCGTCTG CTACAGCTCT TTCAGATGAT GGTGCGGTTT | 550 |
CATCTGACGA GGAACTGAGA GAAGATGATG ACATAGCAGC GGATGACAGC | 600 |
CAACAAAGAA GCAATGACCG CGATCTGAAG GACCAGCTAC TACGCAAATT | 650 |
TGGTAGCCAT ATCAGTTCAT TGAAACTCGA GTTCTCTAAA AAGAAGAAGA | 700 |
AAGGGAAGCT ACCAAGAGAA GCAAGACAAG CGTTGCTCGA TTGGTGGAAT | 750 |
GTTCATAATA AATGGCCTTA CCCTACTGAA GGCGACAAAA TATCTCTGGC | 800 |
TGAAGAAACA GGTTTGGATC AAAAACAAAT CAACAATTGG TTTATAAACC | 850 |
AAAGGAAACG CCATTGGAAG CCTTCGGAGA ACATGCCGTT TGATATGATG | 900 |
GACGATTCTA ATGAAACATT CTTTACCGAG TAA | 950 |
>AT1G70510.1 longest ORF length:310
MDRMCGFRST EDYSEKATLM MPSDYQSLIC STTGDNQRLF GSDELATALS | 50 |
SELLPRIRKA EDNFSLSVIK SKIASHPLYP RLLQTYIDCQ KVGAPMEIAC | 100 |
ILEEIQRENH VYKRDVAPLS CFGADPELDE FMETYCDILV KYKTDLARPF | 150 |
DEATTFINKI EMQLQNLCTG PASATALSDD GAVSSDEELR EDDDIAADDS | 200 |
QQRSNDRDLK DQLLRKFGSH ISSLKLEFSK KKKKGKLPRE ARQALLDWWN | 250 |
VHNKWPYPTE GDKISLAEET GLDQKQINNW FINQRKRHWK PSENMPFDMM | 300 |
DDSNETFFTE | 350 |