fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G71030 MYBL2, ATMYBL2 ARABIDOPSIS MYB-LIKE 2, MYB-like 2 (.1)

>AT1G71030.1 CDS map

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Uncut enzymes: Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, ApoI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BglII, BlpI, BmrI, BpmI, BsaBI, BsaI, BsaJI, BsaXI, BseRI, BsgI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstUI, BstXI, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DdeI, DraI, DraIII, DrdI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, Hpy99I, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, MspA1I, MwoI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SphI, SspI, StuI, StyI, SwaI, TliI, TseI, TspRI, XcmI, XhoI, XmaI
Name Recognition sequence Cut positions
AatII GACGT|C 314
AciI C|CGC 10
AluI AG|CT 141, 246, 508
BamHI G|GATCC 218
BclI T|GATCA 363
BfaI C|TAG 309, 441, 528
BsaAI PyAC|GTPu 82
BsaHI GPu|CGPyC 314
BsaWI [AT]|CCGG[AT] 37, 448
BsiEI CGPuPy|CG 491
BsiHKAI G[AT]GC[AT]|C 20
BslI CCNNNNN|NNGG 36
Bsp1286I G[GAT]GC[CAT]|C 20
BssKI |CCNGG 192, 488
BstNI CC|[AT]GG 192
BstYI Pu|GATCPy 218
Cac8I GCN|NGC 507
DpnI GA-CH3|TC 128, 217, 362
DpnII |GATC 128, 217, 362
EaeI Py|GGCCPu 491
EagI C|GGCCG 491
HaeIII GG|CC 87, 490
HindIII A|AGCTT 142
HinfI G|ANTC 262, 384, 525, 534
HpaII C|CGG 36, 447, 488
Hpy188I TCN|GA 381, 429, 580
HpyCH4III ACN|GT 49
HpyCH4IV A|CGT 81, 313
HpyCH4V TG|CA 42, 148
MboI |GATC 128, 217, 362
MfeI C|AATTG 423
MseI T|TAA 96
MspI C|CGG 36, 447, 488
NciI CC|[CG]GG 488
NlaIII CATG| 146, 341, 387
NlaIV GGN|NCC 218
PflFI GACN|NNGTC 455
PspGI |CC[AT]GG 192
RsaI GT|AC 417, 438, 444
Sau3AI |GATC 128, 217, 362
ScaI AGT|ACT 439
ScrFI CC|NGG 192, 488
SmlI C|TPyPuAG 139
SnaBI TAC|GTA 82
SpeI A|CTAGT 442
Taqƒ¿I T|CGA 61, 73, 264
TfiI G|A[AT]TC 262, 384, 534
Tsp45I |GT[CG]AC 316, 495
Tsp509I |AATT 400, 422
Tth111I GACN|NNGTC 455
XbaI T|CTAGA 310
XmnI GAANN|NNTTC 569


Click here to view TAIR data

>AT1G71030.1 length:588
ATGAACAAAA CCCGCCTTCG TGCTCTCTCC CCACCTTCCG GTATGCAACA 
50
CCGTAAGAGA TGTCGATTGA GAGGTCGAAA CTACGTAAGG CCAGAAGTTA 
100
AACAACGCAA CTTCTCAAAA GATGAAGACG ATCTCATCCT CAAGCTTCAT 
150
GCACTTCTTG GCAATAGATG GTCATTGATA GCGGGAAGAT TGCCAGGACG 
200
AACCGACAAC GAAGTTAGGA TCCATTGGGA AACTTACCTA AAAAGGAAGC 
250
TCGTAAAAAT GGGAATCGAC CCAACCAATC ATCGTCTCCA CCATCACACC 
300
AACTACATTT CTAGACGTCA CCTCCATTCT TCACATAAGG AACATGAAAC 
350
CAAGATTATT AGTGATCAAT CTTCTTCGGT ATCCGAATCA TGTGGTGTAA 
400
CAATTTTGCC CATTCCAAGT ACCAATTGCT CGGAGGATAG TACTAGTACC 
450
GGACGAAGTC ATTTGCCTGA CCTAAACATT GGTCTCATCC CGGCCGTGAC 
500
TTCTTTGCCA GCTCTTTGCC TTCAGGACTC TAGCGAATCC TCTACCAATG 
550
GTTCAACAGG TCAAGAAACG CTTCTTCTAT TCCGATGA
600

>AT1G71030.1 longest ORF length:195
MNKTRLRALS PPSGMQHRKR CRLRGRNYVR PEVKQRNFSK DEDDLILKLH 
50
ALLGNRWSLI AGRLPGRTDN EVRIHWETYL KRKLVKMGID PTNHRLHHHT 
100
NYISRRHLHS SHKEHETKII SDQSSSVSES CGVTILPIPS TNCSEDSTST 
150
GRSHLPDLNI GLIPAVTSLP ALCLQDSSES STNGSTGQET LLLFR
200