fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G71450 Integrase-type DNA-binding superfamily protein (.1)

>AT1G71450.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 15
PstI CTGCA|G 266
SacI GAGCT|C 241


Click here to view TAIR data

>AT1G71450.1 length:552
ATGGCTGGTC TTAGGAATTC CGGTAACAGC GACAAAGCGC AAAACGATGG 
50
CAAAGGTGTA CCATCTGCCT ACAGAGGAGT CCGGAAGAGA AAATGGGGGA 
100
AATGGGTGTC TGAAATCCGT GAACCGGGGA CCAAGAACCG TATCTGGCTA 
150
GGCAGTTTCG AGACTCCTGA AATGGCTGCA ACCGCATACG ACGTGGCAGC 
200
ATTTCATTTC AGAGGGAGAG AAGCTCGTCT CAACTTCCCT GAGCTCGCCA 
250
GCAGCCTTCC ACGTCCTGCA GACTCTAGCT CAGACAGCAT TCGCATGGCA 
300
GTTCATGAGG CAACACTCTG CCGCACCACC GAAGGAACAG AGTCAGCCAT 
350
GCAAGTGGAC AGCTCAAGCT CCTCCAATGT AGCTCCAACA ATGGTCAGAC 
400
TCTCGCCCAG GGAAATTCAA GCGATCAACG AGTCAACTTT GGGATCTCCT 
450
ACTACAATGA TGCATTCAAC ATACGACCCT ATGGAGTTTG CTAATGATGT 
500
GGAGATGAAT GCTTGGGAAA CATACCAGAG TGACTTTCTT TGGGACCCTT 
550
AA
600

>AT1G71450.1 longest ORF length:183
MAGLRNSGNS DKAQNDGKGV PSAYRGVRKR KWGKWVSEIR EPGTKNRIWL 
50
GSFETPEMAA TAYDVAAFHF RGREARLNFP ELASSLPRPA DSSSDSIRMA 
100
VHEATLCRTT EGTESAMQVD SSSSSNVAPT MVRLSPREIQ AINESTLGSP 
150
TTMMHSTYDP MEFANDVEMN AWETYQSDFL WDP
200