fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G71520 Integrase-type DNA-binding superfamily protein (.1)

>AT1G71520.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 352
NcoI C|CATGG 315, 359
SmaI CCC|GGG 93
StyI C|C[AT][AT]GG 315, 359


Click here to view TAIR data

>AT1G71520.1 length:432
ATGGATTCAA GAGACACCGG AGAAACTGAC CAGAGCAAGT ACAAAGGTAT 
50
CCGTCGTCGG AAATGGGGAA AATGGGTATC AGAGATTCGT GTCCCGGGAA 
100
CTCGTCAACG TCTCTGGTTA GGCTCTTTCT CCACCGCAGA AGGCGCTGCC 
150
GTAGCCCACG ACGTCGCTTT TTACTGCTTG CACCGACCAT CTTCCCTCGA 
200
CGACGAATCT TTTAACTTCC CTCACTTACT TACAACCTCC CTCGCCTCCA 
250
ATATATCTCC TAAGTCCATC CAAAAAGCTG CTTCCGACGC CGGCATGGCC 
300
GTGGACGCCG GATTCCATGG TGCTGTGTCT GGGAGTGGTG GTTGTGAAGA 
350
GAGATCTTCC ATGGCGAATA TGGAGGAGGA GGACAAACTT AGTATCTCCG 
400
TGTATGATTA TCTTGAAGAC GATCTCGTTT GA
450

>AT1G71520.1 longest ORF length:143
MDSRDTGETD QSKYKGIRRR KWGKWVSEIR VPGTRQRLWL GSFSTAEGAA 
50
VAHDVAFYCL HRPSSLDDES FNFPHLLTTS LASNISPKSI QKAASDAGMA 
100
VDAGFHGAVS GSGGCEERSS MANMEEEDKL SISVYDYLED DLV
150