fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G71930 VND7, ANAC030 Arabidopsis NAC domain containing protein 30, vascular related NAC-domain protein 7 (.1)

>AT1G71930.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 894
NcoI C|CATGG 151, 508
SacI GAGCT|C 362, 691
StyI C|C[AT][AT]GG 151, 508


Click here to view TAIR data

>AT1G71930.1 length:975
ATGGATAATA TAATGCAATC GTCAATGCCA CCGGGATTCC GATTTCATCC 
50
GACAGAGGAA GAGCTTGTGG GTTATTACCT AGATAGGAAG ATCAATTCAA 
100
TGAAGAGTGC TTTAGATGTC ATTGTAGAGA TTGATCTCTA CAAAATGGAG 
150
CCATGGGATA TACAAGCGAG GTGTAAACTA GGGTATGAAG AGCAAAACGA 
200
GTGGTACTTC TTTAGTCATA AGGACAGGAA GTACCCTACC GGGACTAGGA 
250
CCAACCGAGC CACTGCGGCT GGGTTCTGGA AAGCCACGGG TAGAGACAAG 
300
GCGGTACTAT CAAAAAACAG TGTCATCGGA ATGCGGAAGA CACTTGTCTA 
350
CTACAAGGGT CGAGCTCCTA ATGGAAGAAA GTCCGATTGG ATCATGCACG 
400
AATACCGTCT CCAAAACTCC GAGCTTGCCC CGGTTCAGGA GGAAGGCTGG 
450
GTGGTGTGTC GAGCATTTAG GAAGCCAATT CCAAACCAGA GGCCATTAGG 
500
GTACGAGCCA TGGCAGAACC AGCTCTACCA CGTCGAAAGT AGTAACAACT 
550
ACTCATCTTC AGTGACAATG AACACGAGTC ATCATATCGG TGCATCTTCA 
600
TCAAGTCATA ACCTTAATCA AATGCTCATG AGCAATAACC ACTACAATCC 
650
TAATAATACA TCCTCATCGA TGCATCAATA TGGCAACATT GAGCTCCCGC 
700
AGTTGGACAG CCCGAGCTTG TCGCCTAGTT TAGGGACGAA TAAAGATCAG 
750
AACGAGAGTT TCGAGCAAGA AGAAGAGAAG AGCTTTAACT GTGTGGATTG 
800
GAGAACACTA GATACCTTGC TTGAGACACA AGTCATACAT CCGCATAACC 
850
CTAATATTCT TATGTTCGAA ACGCAGTCGT ATAATCCGGC GCCAAGCTTC 
900
CCTTCCATGC ATCAAAGCTA TAATGAGGTC GAAGCTAATA TTCATCATTC 
950
TCTTGGATGC TTCCCTGACT CGTAA
1000

>AT1G71930.1 longest ORF length:324
MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME 
50
PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK 
100
AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW 
150
VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS 
200
SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ 
250
NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF 
300
PSMHQSYNEV EANIHHSLGC FPDS
350