Locus |
Common name |
Short description |
AT1G71930 |
VND7, ANAC030 |
Arabidopsis NAC domain containing protein 30, vascular related NAC-domain protein 7 (.1) |
>AT1G71930.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
894 |
NcoI
| C|CATGG |
151, 508 |
SacI
| GAGCT|C |
362, 691 |
StyI
| C|C[AT][AT]GG |
151, 508 |
Click here to view TAIR data
>AT1G71930.1 length:975
ATGGATAATA TAATGCAATC GTCAATGCCA CCGGGATTCC GATTTCATCC | 50 |
GACAGAGGAA GAGCTTGTGG GTTATTACCT AGATAGGAAG ATCAATTCAA | 100 |
TGAAGAGTGC TTTAGATGTC ATTGTAGAGA TTGATCTCTA CAAAATGGAG | 150 |
CCATGGGATA TACAAGCGAG GTGTAAACTA GGGTATGAAG AGCAAAACGA | 200 |
GTGGTACTTC TTTAGTCATA AGGACAGGAA GTACCCTACC GGGACTAGGA | 250 |
CCAACCGAGC CACTGCGGCT GGGTTCTGGA AAGCCACGGG TAGAGACAAG | 300 |
GCGGTACTAT CAAAAAACAG TGTCATCGGA ATGCGGAAGA CACTTGTCTA | 350 |
CTACAAGGGT CGAGCTCCTA ATGGAAGAAA GTCCGATTGG ATCATGCACG | 400 |
AATACCGTCT CCAAAACTCC GAGCTTGCCC CGGTTCAGGA GGAAGGCTGG | 450 |
GTGGTGTGTC GAGCATTTAG GAAGCCAATT CCAAACCAGA GGCCATTAGG | 500 |
GTACGAGCCA TGGCAGAACC AGCTCTACCA CGTCGAAAGT AGTAACAACT | 550 |
ACTCATCTTC AGTGACAATG AACACGAGTC ATCATATCGG TGCATCTTCA | 600 |
TCAAGTCATA ACCTTAATCA AATGCTCATG AGCAATAACC ACTACAATCC | 650 |
TAATAATACA TCCTCATCGA TGCATCAATA TGGCAACATT GAGCTCCCGC | 700 |
AGTTGGACAG CCCGAGCTTG TCGCCTAGTT TAGGGACGAA TAAAGATCAG | 750 |
AACGAGAGTT TCGAGCAAGA AGAAGAGAAG AGCTTTAACT GTGTGGATTG | 800 |
GAGAACACTA GATACCTTGC TTGAGACACA AGTCATACAT CCGCATAACC | 850 |
CTAATATTCT TATGTTCGAA ACGCAGTCGT ATAATCCGGC GCCAAGCTTC | 900 |
CCTTCCATGC ATCAAAGCTA TAATGAGGTC GAAGCTAATA TTCATCATTC | 950 |
TCTTGGATGC TTCCCTGACT CGTAA | 1000 |
>AT1G71930.1 longest ORF length:324
MDNIMQSSMP PGFRFHPTEE ELVGYYLDRK INSMKSALDV IVEIDLYKME | 50 |
PWDIQARCKL GYEEQNEWYF FSHKDRKYPT GTRTNRATAA GFWKATGRDK | 100 |
AVLSKNSVIG MRKTLVYYKG RAPNGRKSDW IMHEYRLQNS ELAPVQEEGW | 150 |
VVCRAFRKPI PNQRPLGYEP WQNQLYHVES SNNYSSSVTM NTSHHIGASS | 200 |
SSHNLNQMLM SNNHYNPNNT SSSMHQYGNI ELPQLDSPSL SPSLGTNKDQ | 250 |
NESFEQEEEK SFNCVDWRTL DTLLETQVIH PHNPNILMFE TQSYNPAPSF | 300 |
PSMHQSYNEV EANIHHSLGC FPDS | 350 |
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