fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72010 TCP22 TCP family transcription factor (.1)

>AT1G72010.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRV, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 9, 227, 546
HpaI GTT|AAC 267
PstI CTGCA|G 674
SalI G|TCGAC 606
XbaI T|CTAGA 1044


Click here to view TAIR data

>AT1G72010.1 length:1128
ATGAATCAGA ATTCCTCTGT TGCGGAGGCG ACGCTTCAGC TTAATTCCGG 
50
TGAAAAACCA TCGCCGGGAT CGATTCCGTT TATCTCCTCT GGTCAACACG 
100
GAAACATAAG CACTTCAGCG ACGAGTTCGA CAAGCACAAG CTCAGGTAGT 
150
GCTCTTGCCG TAGTTAAATC CGCCGTGAAA AAACCAACTA AAGATCGGCA 
200
TACTAAAGTC GATGGTCGTG GACGGCGAAT TCGTATGCCG GCGATGTGCG 
250
CCGCTAGAGT TTTTCAGTTA ACAAGAGAGT TAGGTCATAA ATCTGATGGA 
300
GAAACCATCG AGTGGCTTCT CCAACAAGCT GAGCCAGCTA TCATCGCTTC 
350
TACTGGTACT GGTACGATCC CGGCGAATTT CTCAACACTT AACGCTTCTT 
400
TACGCAGTGG TGGTGGCTCC ACCTTGTTTT CTCAGGCGTC GAAATCTTCT 
450
TCTTCGCCAC TCTCGTTTCA TAGCACTGGA ATGTCTCTTT ATGAAGACAA 
500
TAACGGTACT AACGGATCAT CGGTAGATCC TTCTAGGAAG TTACTGAATT 
550
CAGCCGCAAA CGCGGCTGTT TTCGGTTTTC ATCATCAGAT GTATCCACCA 
600
ATAATGTCGA CGGAGAGAAA TCCGAACACT TTAGTGAAAC CTTATAGAGA 
650
AGATTACTTT AAGGAGCCGA GTTCTGCAGC GGAACCAAGC GAGAGTTCTC 
700
AGAAAGCGAG TCAGTTTCAG GAGCAAGAGT TAGCTCAGGG TCGTGGGACG 
750
GCTAATGTGG TGCCTCAACC TATGTGGGCG GTTGCGCCAG GGACTACGAA 
800
TGGAGGTAGT GCGTTCTGGA TGCTTCCGAT GAGCGGTTCG GGTGGGCGGG 
850
AGCAGATGCA GCAGCAGCCT GGTCACCAAA TGTGGGCGTT TAATCCAGGG 
900
AATTATCCAG TTGGGACAGG ACGAGTAGTA ACTGCACCAA TGGGGTCAAT 
950
GATGTTGGGA GGTCAACAGC TAGGATTAGG AGTGGCAGAG GGCAACATGG 
1000
CGGCTGCAAT GCGTGGCAGT AGAGGCGATG GTTTGGCCAT GACTCTAGAT 
1050
CAACATCAGC ATCAGCTCCA ACATCAAGAG CCAAACCAGA GTCAAGCTAG 
1100
TGAAAATGGT GGTGATGACA AAAAGTGA
1150

>AT1G72010.1 longest ORF length:375
MNQNSSVAEA TLQLNSGEKP SPGSIPFISS GQHGNISTSA TSSTSTSSGS 
50
ALAVVKSAVK KPTKDRHTKV DGRGRRIRMP AMCAARVFQL TRELGHKSDG 
100
ETIEWLLQQA EPAIIASTGT GTIPANFSTL NASLRSGGGS TLFSQASKSS 
150
SSPLSFHSTG MSLYEDNNGT NGSSVDPSRK LLNSAANAAV FGFHHQMYPP 
200
IMSTERNPNT LVKPYREDYF KEPSSAAEPS ESSQKASQFQ EQELAQGRGT 
250
ANVVPQPMWA VAPGTTNGGS AFWMLPMSGS GGREQMQQQP GHQMWAFNPG 
300
NYPVGTGRVV TAPMGSMMLG GQQLGLGVAE GNMAAAMRGS RGDGLAMTLD 
350
QHQHQLQHQE PNQSQASENG GDDKK
400