fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72050 TFIIIA transcription factor IIIA (.1.2)

>AT1G72050.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 10
EcoRI G|AATTC 133, 807
NheI G|CTAGC 43
StyI C|C[AT][AT]GG 686


Click here to view TAIR data

>AT1G72050.1 length:975
ATGTTTGAGA GATCTTTTAC TTGCTATGTG GATGATTGTG CTGCTAGCTA 
50
TAGGAGGAAG GATCATCTCA ATAGGCATCT TCTTACACAT AAAGGGAAGC 
100
TCTTTAAGTG TCCGAAGGAG AACTGCAAGA GTGAATTCTC AGTACAGGGA 
150
AATGTTGGTA GGCATGTTAA GAAATATCAT AGTAATGACA ACCGTGATAA 
200
GGACAATACT GGTTTGGGCG ATGGTGATAA GGACAATACT TGTAAGGGGG 
250
ATGATGATAA GGAAAAATCT GGTAGTGGCG GTTGTGAGAA GGAAAATGAA 
300
GGGAATGGCG GAAGTGGTAA GGACAATAAT GGTAATGGCG ATTCTCAGCC 
350
TGCGGAGTGT TCAACTGGTC AGAAGCAGGT TGTCTGCAAA GAAATTGGTT 
400
GTGGAAAAGC CTTTAAGTAT CCTTCACAGC TTCAAAAGCA TCAGGATTCT 
450
CATGTGAAAT TAGACTCTGT GGAGGCATTT TGTTCCGAGC CTGGGTGTAT 
500
GAAGTACTTT ACCAACGAAG AATGCCTCAA GTCACACATA AGATCCTGTC 
550
ATCAGCACAT CAACTGTGAG ATATGTGGTT CTAAGCATTT GAAAAAGAAC 
600
ATCAAGAGAC ATCTACGGAC TCATGATGAA GATTCCTCAC CAGGAGAAAT 
650
CAAGTGTGAA GTTGAGGGTT GCTCTTCGAC TTTCTCCAAG GCTTCTAATC 
700
TTCAGAAACA CATGAAAGCA GTGCACGATG ATATACGTCC CTTTGTCTGT 
750
GGCTTTCCCG GTTGTGGCAT GAGATTTGCT TACAAACATG TCAGAAACAA 
800
GCACGAGAAT TCCGGGTATC ACGTATATAC CTGCGGTGAT TTTGTCGAAA 
850
CTGATGAAGA TTTCACTTCA AGACCGAGAG GTGGACTAAA GAGGAAACAA 
900
GTTACTGCGG AAATGCTGGT ACGAAAGAGA GTCATGCCTC CTCGGTTTGA 
950
TGCAGAAGAA CACGAAACTT GCTAG
1000

>AT1G72050.1 longest ORF length:324
MFERSFTCYV DDCAASYRRK DHLNRHLLTH KGKLFKCPKE NCKSEFSVQG 
50
NVGRHVKKYH SNDNRDKDNT GLGDGDKDNT CKGDDDKEKS GSGGCEKENE 
100
GNGGSGKDNN GNGDSQPAEC STGQKQVVCK EIGCGKAFKY PSQLQKHQDS 
150
HVKLDSVEAF CSEPGCMKYF TNEECLKSHI RSCHQHINCE ICGSKHLKKN 
200
IKRHLRTHDE DSSPGEIKCE VEGCSSTFSK ASNLQKHMKA VHDDIRPFVC 
250
GFPGCGMRFA YKHVRNKHEN SGYHVYTCGD FVETDEDFTS RPRGGLKRKQ 
300
VTAEMLVRKR VMPPRFDAEE HETC
350