fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72210 bHLH096 basic helix-loop-helix (bHLH) DNA-binding superfamily protein (.1)

>AT1G72210.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
PvuII CAG|CTG 911
SalI G|TCGAC 262
StyI C|C[AT][AT]GG 5
XhoI C|TCGAG 830


Click here to view TAIR data

>AT1G72210.1 length:963
ATGGCCTTGG AGGCTGTAGT TTACCCGCAA GATCCGTTCT CCTACATCTC 
50
TTGCAAAGAT TTTCCGTTTT ACGACTTATA CTTTCAAGAA GAAGAAGATC 
100
AAGATCCACA AGATACTAAG AACAACATTA AGCTAGGGCA AGGACAAGGA 
150
CATGGTTTTG CGAGTAATAA TTACAACGGT AGAACCGGAG ATTATAGTGA 
200
TGATTATAAT TACAACGAAG AGGATCTCCA ATGGCCACGA GACCTTCCTT 
250
ATGGATCTGC CGTCGACACC GAGAGCCAGC CTCCACCGTC GGATGTGGCG 
300
GCGGGAGGAG GGAGGAGGAA AAGGAGGAGG ACGAGGAGTA GCAAGAACAA 
350
AGAAGAGATC GAGAACCAGA GGATGACTCA CATCGCCGTT GAAAGAAATC 
400
GCCGGAAACA GATGAACGAG TACCTCGCCG TTCTCCGGTC TCTCATGCCA 
450
CCTTATTATG CTCAAAGGGG AGATCAAGCA TCGATAGTAG GCGGAGCCAT 
500
TAACTACTTA AAGGAGCTTG AGCATCATTT ACAATCAATG GAACCTCCGG 
550
TTAAGACCGC CACAGAAGAC ACCGGAGCCG GCCACGACCA GACCAAAACA 
600
ACCTCGGCTA GTTCGTCGGG ACCATTCTCG GATTTCTTTG CATTTCCTCA 
650
GTACTCGAAC CGGCCTACCT CTGCGGCGGC GGCTGAGGGG ATGGCGGAGA 
700
TAGAGGTAAC GATGGTAGAG AGCCATGCGA GTCTGAAAAT ACTTGCGAAA 
750
AAGAGACCGA GACAGCTTCT TAAACTGGTC TCATCGATAC AGAGCCTAAG 
800
GCTCACTCTT CTCCATCTAA ACGTCACAAC TCGAGACGAC TCCGTCCTCT 
850
ATTCCATCAG CGTCAAGGTT GAAGAAGGGA GCCAATTGAA TACAGTAGAA 
900
GATATTGCAG CAGCTGTGAA TCAAATCCTA AGGAGGATCG AAGAAGAGTC 
950
ATCCTTTAGC TAG
1000

>AT1G72210.1 longest ORF length:320
MALEAVVYPQ DPFSYISCKD FPFYDLYFQE EEDQDPQDTK NNIKLGQGQG 
50
HGFASNNYNG RTGDYSDDYN YNEEDLQWPR DLPYGSAVDT ESQPPPSDVA 
100
AGGGRRKRRR TRSSKNKEEI ENQRMTHIAV ERNRRKQMNE YLAVLRSLMP 
150
PYYAQRGDQA SIVGGAINYL KELEHHLQSM EPPVKTATED TGAGHDQTKT 
200
TSASSSGPFS DFFAFPQYSN RPTSAAAAEG MAEIEVTMVE SHASLKILAK 
250
KRPRQLLKLV SSIQSLRLTL LHLNVTTRDD SVLYSISVKV EEGSQLNTVE 
300
DIAAAVNQIL RRIEEESSFS 
350