fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72360 AtERF73, HRE1 HYPOXIA RESPONSIVE ERF \(ETHYLENE RESPONSE FACTOR\) 1, ethylene response factor 73, Integrase-type DNA-binding superfamily protein (.1.2.3)

>AT1G72360.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 421
HindIII A|AGCTT 9
NcoI C|CATGG 25
PvuII CAG|CTG 167
StyI C|C[AT][AT]GG 25, 94, 269


Click here to view TAIR data

>AT1G72360.1 length:636
ATGTCTCAAA GCTTTGAACT TTATCCATGG CTAGGCTCAG CATCAGATGG 
50
GAAGAAGAAA CAGAGCAGTC GGTACAAAGG AATCAGAAGA AGGCCTTGGG 
100
GAAGATGGGC GGCTGAGATA CGTGATCCAA TCAAAGGAGT TCGAGTTTGG 
150
CTCGGGACTT TCAACACAGC TGAAGAAGCT GCAAGAGCTT ATGATCTTGA 
200
AGCTAAGAGA ATCCGTGGAG CCAAAGCTAA GCTCAATTTC CCTAACGAAT 
250
CCTCTGGAAA GAGGAAAGCC AAGGCTAAGA CTGTGCAACA GGTAGAGGAG 
300
AATCATGAGG CTGATCTTGA TGTGGCGGTG GTAAGCTCAG CGCCTAGTAG 
350
TAGCTGTCTT GATTTCTTGT GGGAGGAGAA TAATCCGGAC ACGCTTCTGA 
400
TTGATACACA ATGGCTCGAA GATATCATCA TGGGCGATGC GAATAAGAAA 
450
CATGAACCTA ATGATAGTGA AGAAGCCAAC AACGTTGATG CTTCTCTGCT 
500
TTCTGAAGAG CTTCTTGCTT TTGAGAACCA GACCGAATAT TTCTCGCAGA 
550
TGCCTTTTAC GGAGGGAAAC TGTGATTCCT CAACGTCTCT GAGTAGTCTC 
600
TTTGATGGAG GCAATGACAT GGGTCTATGG TCCTGA
650

>AT1G72360.1 longest ORF length:211
MSQSFELYPW LGSASDGKKK QSSRYKGIRR RPWGRWAAEI RDPIKGVRVW 
50
LGTFNTAEEA ARAYDLEAKR IRGAKAKLNF PNESSGKRKA KAKTVQQVEE 
100
NHEADLDVAV VSSAPSSSCL DFLWEENNPD TLLIDTQWLE DIIMGDANKK 
150
HEPNDSEEAN NVDASLLSEE LLAFENQTEY FSQMPFTEGN CDSSTSLSSL 
200
FDGGNDMGLW S
250