fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72360 AtERF73, HRE1 HYPOXIA RESPONSIVE ERF \(ETHYLENE RESPONSE FACTOR\) 1, ethylene response factor 73, Integrase-type DNA-binding superfamily protein (.1.2.3)

>AT1G72360.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 574
PvuII CAG|CTG 320
StyI C|C[AT][AT]GG 247, 422


Click here to view TAIR data

>AT1G72360.2 length:789
ATGTGCGGAG GAGCTGTAAT TTCCGATTAC ATAGCGCCGG AGAAGATTGC 
50
GAGATCATCT GGAAAGTCTT CCTGGAGAAG TAATGGCGTC TTTGACTGCT 
100
CAATCTACGA TTTCGATGGA AATTTCGATG AATTAGAGTC CGATGAGCCA 
150
TTTGTCTTCT CCTCTACTCA CAAACATCAT GCTTCAGGCT CAGCATCAGA 
200
TGGGAAGAAG AAACAGAGCA GTCGGTACAA AGGAATCAGA AGAAGGCCTT 
250
GGGGAAGATG GGCGGCTGAG ATACGTGATC CAATCAAAGG AGTTCGAGTT 
300
TGGCTCGGGA CTTTCAACAC AGCTGAAGAA GCTGCAAGAG CTTATGATCT 
350
TGAAGCTAAG AGAATCCGTG GAGCCAAAGC TAAGCTCAAT TTCCCTAACG 
400
AATCCTCTGG AAAGAGGAAA GCCAAGGCTA AGACTGTGCA ACAGGTAGAG 
450
GAGAATCATG AGGCTGATCT TGATGTGGCG GTGGTAAGCT CAGCGCCTAG 
500
TAGTAGCTGT CTTGATTTCT TGTGGGAGGA GAATAATCCG GACACGCTTC 
550
TGATTGATAC ACAATGGCTC GAAGATATCA TCATGGGCGA TGCGAATAAG 
600
AAACATGAAC CTAATGATAG TGAAGAAGCC AACAACGTTG ATGCTTCTCT 
650
GCTTTCTGAA GAGCTTCTTG CTTTTGAGAA CCAGACCGAA TATTTCTCGC 
700
AGATGCCTTT TACGGAGGGA AACTGTGATT CCTCAACGTC TCTGAGTAGT 
750
CTCTTTGATG GAGGCAATGA CATGGGTCTA TGGTCCTGA
800

>AT1G72360.2 longest ORF length:262
MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP 
50
FVFSSTHKHH ASGSASDGKK KQSSRYKGIR RRPWGRWAAE IRDPIKGVRV 
100
WLGTFNTAEE AARAYDLEAK RIRGAKAKLN FPNESSGKRK AKAKTVQQVE 
150
ENHEADLDVA VVSSAPSSSC LDFLWEENNP DTLLIDTQWL EDIIMGDANK 
200
KHEPNDSEEA NNVDASLLSE ELLAFENQTE YFSQMPFTEG NCDSSTSLSS 
250
LFDGGNDMGL WS
300