fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72360 AtERF73, HRE1 HYPOXIA RESPONSIVE ERF \(ETHYLENE RESPONSE FACTOR\) 1, ethylene response factor 73, Integrase-type DNA-binding superfamily protein (.1.2.3)

>AT1G72360.3 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 568
PvuII CAG|CTG 314
StyI C|C[AT][AT]GG 241, 416


Click here to view TAIR data

>AT1G72360.3 length:783
ATGTGCGGAG GAGCTGTAAT TTCCGATTAC ATAGCGCCGG AGAAGATTGC 
50
GAGATCATCT GGAAAGTCTT CCTGGAGAAG TAATGGCGTC TTTGACTGCT 
100
CAATCTACGA TTTCGATGGA AATTTCGATG AATTAGAGTC CGATGAGCCA 
150
TTTGTCTTCT CCTCTACTCA CAAACATCAT GCTTCAGCAT CAGATGGGAA 
200
GAAGAAACAG AGCAGTCGGT ACAAAGGAAT CAGAAGAAGG CCTTGGGGAA 
250
GATGGGCGGC TGAGATACGT GATCCAATCA AAGGAGTTCG AGTTTGGCTC 
300
GGGACTTTCA ACACAGCTGA AGAAGCTGCA AGAGCTTATG ATCTTGAAGC 
350
TAAGAGAATC CGTGGAGCCA AAGCTAAGCT CAATTTCCCT AACGAATCCT 
400
CTGGAAAGAG GAAAGCCAAG GCTAAGACTG TGCAACAGGT AGAGGAGAAT 
450
CATGAGGCTG ATCTTGATGT GGCGGTGGTA AGCTCAGCGC CTAGTAGTAG 
500
CTGTCTTGAT TTCTTGTGGG AGGAGAATAA TCCGGACACG CTTCTGATTG 
550
ATACACAATG GCTCGAAGAT ATCATCATGG GCGATGCGAA TAAGAAACAT 
600
GAACCTAATG ATAGTGAAGA AGCCAACAAC GTTGATGCTT CTCTGCTTTC 
650
TGAAGAGCTT CTTGCTTTTG AGAACCAGAC CGAATATTTC TCGCAGATGC 
700
CTTTTACGGA GGGAAACTGT GATTCCTCAA CGTCTCTGAG TAGTCTCTTT 
750
GATGGAGGCA ATGACATGGG TCTATGGTCC TGA
800

>AT1G72360.3 longest ORF length:260
MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP 
50
FVFSSTHKHH ASASDGKKKQ SSRYKGIRRR PWGRWAAEIR DPIKGVRVWL 
100
GTFNTAEEAA RAYDLEAKRI RGAKAKLNFP NESSGKRKAK AKTVQQVEEN 
150
HEADLDVAVV SSAPSSSCLD FLWEENNPDT LLIDTQWLED IIMGDANKKH 
200
EPNDSEEANN VDASLLSEEL LAFENQTEYF SQMPFTEGNC DSSTSLSSLF 
250
DGGNDMGLWS 
300