Locus |
Common name |
Short description |
AT1G72360 |
AtERF73, HRE1 |
HYPOXIA RESPONSIVE ERF \(ETHYLENE RESPONSE FACTOR\) 1, ethylene response factor 73, Integrase-type DNA-binding superfamily protein (.1.2.3) |
>AT1G72360.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
568 |
PvuII
| CAG|CTG |
314 |
StyI
| C|C[AT][AT]GG |
241, 416 |
Click here to view TAIR data
>AT1G72360.3 length:783
ATGTGCGGAG GAGCTGTAAT TTCCGATTAC ATAGCGCCGG AGAAGATTGC | 50 |
GAGATCATCT GGAAAGTCTT CCTGGAGAAG TAATGGCGTC TTTGACTGCT | 100 |
CAATCTACGA TTTCGATGGA AATTTCGATG AATTAGAGTC CGATGAGCCA | 150 |
TTTGTCTTCT CCTCTACTCA CAAACATCAT GCTTCAGCAT CAGATGGGAA | 200 |
GAAGAAACAG AGCAGTCGGT ACAAAGGAAT CAGAAGAAGG CCTTGGGGAA | 250 |
GATGGGCGGC TGAGATACGT GATCCAATCA AAGGAGTTCG AGTTTGGCTC | 300 |
GGGACTTTCA ACACAGCTGA AGAAGCTGCA AGAGCTTATG ATCTTGAAGC | 350 |
TAAGAGAATC CGTGGAGCCA AAGCTAAGCT CAATTTCCCT AACGAATCCT | 400 |
CTGGAAAGAG GAAAGCCAAG GCTAAGACTG TGCAACAGGT AGAGGAGAAT | 450 |
CATGAGGCTG ATCTTGATGT GGCGGTGGTA AGCTCAGCGC CTAGTAGTAG | 500 |
CTGTCTTGAT TTCTTGTGGG AGGAGAATAA TCCGGACACG CTTCTGATTG | 550 |
ATACACAATG GCTCGAAGAT ATCATCATGG GCGATGCGAA TAAGAAACAT | 600 |
GAACCTAATG ATAGTGAAGA AGCCAACAAC GTTGATGCTT CTCTGCTTTC | 650 |
TGAAGAGCTT CTTGCTTTTG AGAACCAGAC CGAATATTTC TCGCAGATGC | 700 |
CTTTTACGGA GGGAAACTGT GATTCCTCAA CGTCTCTGAG TAGTCTCTTT | 750 |
GATGGAGGCA ATGACATGGG TCTATGGTCC TGA | 800 |
>AT1G72360.3 longest ORF length:260
MCGGAVISDY IAPEKIARSS GKSSWRSNGV FDCSIYDFDG NFDELESDEP | 50 |
FVFSSTHKHH ASASDGKKKQ SSRYKGIRRR PWGRWAAEIR DPIKGVRVWL | 100 |
GTFNTAEEAA RAYDLEAKRI RGAKAKLNFP NESSGKRKAK AKTVQQVEEN | 150 |
HEADLDVAVV SSAPSSSCLD FLWEENNPDT LLIDTQWLED IIMGDANKKH | 200 |
EPNDSEEANN VDASLLSEEL LAFENQTEYF SQMPFTEGNC DSSTSLSSLF | 250 |
DGGNDMGLWS | 300 |
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