fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72450 TIFY11B, JAZ6 TIFY DOMAIN PROTEIN 11B, jasmonate-zim-domain protein 6 (.1)

>AT1G72450.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 802
NdeI CA|TATG 745
SacI GAGCT|C 617


Click here to view TAIR data

>AT1G72450.1 length:810
ATGTCAACGG GACAAGCGCC GGAGAAGTCC AATTTTTCTC AGAGATGTAG 
50
TCTGCTCAGC CGGTACTTGA AGGAGAAGGG AAGTTTTGGG AATATTAATA 
100
TGGGGTTGGC TCGAAAATCC GATCTTGAAC TCGCCGGAAA ATTCGATCTC 
150
AAAGGACAAC AAAATGTGAT TAAGAAGGTA GAGACCTCAG AAACTAGACC 
200
GTTCAAGTTG ATTCAGAAGT TTTCTATTGG TGAGGCCTCT ACTTCTACCG 
250
AAGACAAAGC CATATATATT GATCTCAGTG AACCGGCAAA AGTAGCACCG 
300
GAGTCTGGAA ATTCACAGTT GACCATATTC TTTGGAGGAA AAGTTATGGT 
350
TTTCAACGAG TTTCCTGAAG ACAAAGCTAA GGAGATAATG GAAGTAGCTA 
400
AAGAAGCGAA TCATGTTGCT GTTGATTCTA AGAACAGTCA GAGTCACATG 
450
AATCTTGACA AAAGCAACGT GGTGATTCCC GATCTTAACG AGCCAACGAG 
500
TTCCGGGAAC AATGAAGATC AAGAAACTGG GCAGCAACAT CAGGTTGTGG 
550
AACGCATTGC AAGAAGAGCT TCTCTTCATC GATTCTTTGC TAAACGAAAA 
600
GACAGGGCTG TGGCTAGAGC TCCATATCAA GTGAACCAAC ACGGTAGTCA 
650
TCTTCCTCCC AAGCCAGAGA TGGTTGCTCC ATCGATAAAG TCAGGCCAAT 
700
CGTCGCAACA CATTGCAACT CCTCCAAAAC CAAAGGCCCA TAACCATATG 
750
CCGATGGAGG TGGACAAGAA AGAAGGACAA TCTTCCAAAA ACCTTGAACT 
800
CAAGCTTTAG 
850

>AT1G72450.1 longest ORF length:269
MSTGQAPEKS NFSQRCSLLS RYLKEKGSFG NINMGLARKS DLELAGKFDL 
50
KGQQNVIKKV ETSETRPFKL IQKFSIGEAS TSTEDKAIYI DLSEPAKVAP 
100
ESGNSQLTIF FGGKVMVFNE FPEDKAKEIM EVAKEANHVA VDSKNSQSHM 
150
NLDKSNVVIP DLNEPTSSGN NEDQETGQQH QVVERIARRA SLHRFFAKRK 
200
DRAVARAPYQ VNQHGSHLPP KPEMVAPSIK SGQSSQHIAT PPKPKAHNHM 
250
PMEVDKKEGQ SSKNLELKL
300