Locus |
Common name |
Short description |
AT1G72450 |
TIFY11B, JAZ6 |
TIFY DOMAIN PROTEIN 11B, jasmonate-zim-domain protein 6 (.1) |
>AT1G72450.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
HindIII
| A|AGCTT |
802 |
NdeI
| CA|TATG |
745 |
SacI
| GAGCT|C |
617 |
Click here to view TAIR data
>AT1G72450.1 length:810
ATGTCAACGG GACAAGCGCC GGAGAAGTCC AATTTTTCTC AGAGATGTAG | 50 |
TCTGCTCAGC CGGTACTTGA AGGAGAAGGG AAGTTTTGGG AATATTAATA | 100 |
TGGGGTTGGC TCGAAAATCC GATCTTGAAC TCGCCGGAAA ATTCGATCTC | 150 |
AAAGGACAAC AAAATGTGAT TAAGAAGGTA GAGACCTCAG AAACTAGACC | 200 |
GTTCAAGTTG ATTCAGAAGT TTTCTATTGG TGAGGCCTCT ACTTCTACCG | 250 |
AAGACAAAGC CATATATATT GATCTCAGTG AACCGGCAAA AGTAGCACCG | 300 |
GAGTCTGGAA ATTCACAGTT GACCATATTC TTTGGAGGAA AAGTTATGGT | 350 |
TTTCAACGAG TTTCCTGAAG ACAAAGCTAA GGAGATAATG GAAGTAGCTA | 400 |
AAGAAGCGAA TCATGTTGCT GTTGATTCTA AGAACAGTCA GAGTCACATG | 450 |
AATCTTGACA AAAGCAACGT GGTGATTCCC GATCTTAACG AGCCAACGAG | 500 |
TTCCGGGAAC AATGAAGATC AAGAAACTGG GCAGCAACAT CAGGTTGTGG | 550 |
AACGCATTGC AAGAAGAGCT TCTCTTCATC GATTCTTTGC TAAACGAAAA | 600 |
GACAGGGCTG TGGCTAGAGC TCCATATCAA GTGAACCAAC ACGGTAGTCA | 650 |
TCTTCCTCCC AAGCCAGAGA TGGTTGCTCC ATCGATAAAG TCAGGCCAAT | 700 |
CGTCGCAACA CATTGCAACT CCTCCAAAAC CAAAGGCCCA TAACCATATG | 750 |
CCGATGGAGG TGGACAAGAA AGAAGGACAA TCTTCCAAAA ACCTTGAACT | 800 |
CAAGCTTTAG | 850 |
>AT1G72450.1 longest ORF length:269
MSTGQAPEKS NFSQRCSLLS RYLKEKGSFG NINMGLARKS DLELAGKFDL | 50 |
KGQQNVIKKV ETSETRPFKL IQKFSIGEAS TSTEDKAIYI DLSEPAKVAP | 100 |
ESGNSQLTIF FGGKVMVFNE FPEDKAKEIM EVAKEANHVA VDSKNSQSHM | 150 |
NLDKSNVVIP DLNEPTSSGN NEDQETGQQH QVVERIARRA SLHRFFAKRK | 200 |
DRAVARAPYQ VNQHGSHLPP KPEMVAPSIK SGQSSQHIAT PPKPKAHNHM | 250 |
PMEVDKKEGQ SSKNLELKL | 300 |
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