fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72740 Homeodomain-like/winged-helix DNA-binding family protein (.1.2)

>AT1G72740.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 99
EcoRI G|AATTC 106
PstI CTGCA|G 245
StyI C|C[AT][AT]GG 361


Click here to view TAIR data

>AT1G72740.1 length:864
ATGGGAAACC AGAAACTAAA GTGGACGGCG GAGGAAGAGG AGGCGTTACT 
50
CGCCGGAATC AGAAAGCACG GTCCTGGAAA GTGGAAGAAT ATTCTCCGGG 
100
ATCCAGAATT CGCTGATCAG CTCATCCATC GCTCCAACAT TGACCTAAAG 
150
GATAAGTGGC GTAACTTGAG TGTTCCCCCT GGTACTCAAA GTTTAACTAA 
200
TAAGGCACGG CCAGCAAAAG TCAAAGAGGA AGGCGACACT CCGGCTGCAG 
250
ATGCAAATGA TGCTGTCACT ATTCCACGGC CTATTCCTAC TATTCCACCT 
300
CCTCCCGGTC GGCGTACTTT ACCTTCTGAG TTGATCCCTG ATGAAAATAC 
350
AAAGAATGCT CCTAGGTATG ACGGGGTGAT ATTTGAAGCT CTCTCTGCTT 
400
TAGCCGATGG TAATGGATCT GATGTCAGTT CCATTTATCA TTTCATTGAG 
450
CCCAGGCATG AAGTACCGCC AAATTTTAGA AGAATCCTTA GTACAAGACT 
500
GAGGAGGCTT GCAGCTCAGA GCAAACTTGA AAAGGTTAGC ACCTTCAAAT 
550
CTATACAGAA CTTCTATAAG ATACCCGATC CATCAGGAAC AAAAATAGGT 
600
GTCCCAAAAC CAAAGGAGAC ACATACGAAG CTGCGCCAAG CAAACAATCA 
650
GACCTCTGCT GATTCACAAC AGATGATCGA GGAAGCTGCA ATAACCGCAG 
700
CCTGTAAAGT CGTAGAGGCG GAGAATAAAA TAGACGTTGC CAAACTAGCA 
750
GCAGAAGAGT TTGAGAAGAT GACAAAGATT GCAGAAGAAA ATAGAAAACT 
800
CCTGGTCATA GCTACTGAGA TGCATGAACT ATGTTCCTGT GGGGAGACTA 
850
TGCTCTTGGC TTGA
900

>AT1G72740.1 longest ORF length:287
MGNQKLKWTA EEEEALLAGI RKHGPGKWKN ILRDPEFADQ LIHRSNIDLK 
50
DKWRNLSVPP GTQSLTNKAR PAKVKEEGDT PAADANDAVT IPRPIPTIPP 
100
PPGRRTLPSE LIPDENTKNA PRYDGVIFEA LSALADGNGS DVSSIYHFIE 
150
PRHEVPPNFR RILSTRLRRL AAQSKLEKVS TFKSIQNFYK IPDPSGTKIG 
200
VPKPKETHTK LRQANNQTSA DSQQMIEEAA ITAACKVVEA ENKIDVAKLA 
250
AEEFEKMTKI AEENRKLLVI ATEMHELCSC GETMLLA
300