fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72740 Homeodomain-like/winged-helix DNA-binding family protein (.1.2)

>AT1G72740.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 99
EcoRI G|AATTC 106
PstI CTGCA|G 245
StyI C|C[AT][AT]GG 361


Click here to view TAIR data

>AT1G72740.2 length:846
ATGGGAAACC AGAAACTAAA GTGGACGGCG GAGGAAGAGG AGGCGTTACT 
50
CGCCGGAATC AGAAAGCACG GTCCTGGAAA GTGGAAGAAT ATTCTCCGGG 
100
ATCCAGAATT CGCTGATCAG CTCATCCATC GCTCCAACAT TGACCTAAAG 
150
GATAAGTGGC GTAACTTGAG TGTTCCCCCT GGTACTCAAA GTTTAACTAA 
200
TAAGGCACGG CCAGCAAAAG TCAAAGAGGA AGGCGACACT CCGGCTGCAG 
250
ATGCAAATGA TGCTGTCACT ATTCCACGGC CTATTCCTAC TATTCCACCT 
300
CCTCCCGGTC GGCGTACTTT ACCTTCTGAG TTGATCCCTG ATGAAAATAC 
350
AAAGAATGCT CCTAGGTATG ACGGGGTGAT ATTTGAAGCT CTCTCTGCTT 
400
TAGCCGATGG TAATGGATCT GATGTCAGTT CCATTTATCA TTTCATTGAG 
450
CCCAGGCATG AAGTACCGCC AAATTTTAGA AGAATCCTTA GTACAAGACT 
500
GAGGAGGCTT GCAGCTCAGA GCAAACTTGA AAAGATACAG AACTTCTATA 
550
AGATACCCGA TCCATCAGGA ACAAAAATAG GTGTCCCAAA ACCAAAGGAG 
600
ACACATACGA AGCTGCGCCA AGCAAACAAT CAGACCTCTG CTGATTCACA 
650
ACAGATGATC GAGGAAGCTG CAATAACCGC AGCCTGTAAA GTCGTAGAGG 
700
CGGAGAATAA AATAGACGTT GCCAAACTAG CAGCAGAAGA GTTTGAGAAG 
750
ATGACAAAGA TTGCAGAAGA AAATAGAAAA CTCCTGGTCA TAGCTACTGA 
800
GATGCATGAA CTATGTTCCT GTGGGGAGAC TATGCTCTTG GCTTGA
850

>AT1G72740.2 longest ORF length:281
MGNQKLKWTA EEEEALLAGI RKHGPGKWKN ILRDPEFADQ LIHRSNIDLK 
50
DKWRNLSVPP GTQSLTNKAR PAKVKEEGDT PAADANDAVT IPRPIPTIPP 
100
PPGRRTLPSE LIPDENTKNA PRYDGVIFEA LSALADGNGS DVSSIYHFIE 
150
PRHEVPPNFR RILSTRLRRL AAQSKLEKIQ NFYKIPDPSG TKIGVPKPKE 
200
THTKLRQANN QTSADSQQMI EEAAITAACK VVEAENKIDV AKLAAEEFEK 
250
MTKIAEENRK LLVIATEMHE LCSCGETMLL A
300