fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72830 NF-YA3, ATHAP2C, HAP2C "nuclear factor Y, subunit A3", nuclear factor Y, subunit A3 (.1.2.3)

>AT1G72830.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 910
EcoRV GAT|ATC 892
HindIII A|AGCTT 132, 598
NdeI CA|TATG 817
PstI CTGCA|G 823
SacI GAGCT|C 520
XbaI T|CTAGA 802


Click here to view TAIR data

>AT1G72830.1 length:1023
ATGATGCATC AGATGTTGAA TAAGAAAGAT TCAGCTACTC ATTCCACTTT 
50
GCCATACCTT AATACTAGCA TCTCTTGGGG AGTGGTTCCA ACTGATTCCG 
100
TTGCTAATCG TCGCGGTTCT GCTGAATCAC TAAGCTTGAA GGTTGATTCA 
150
AGACCTGGGC ATATACAAAC TACAAAGCAA ATCAGTTTTC AGGACCAAGA 
200
TTCATCTTCA ACACAGTCCA CTGGTCAATC TTATACTGAA GTTGCTAGTA 
250
GTGGTGATGA TAATCCTTCC AGACAAATCT CCTTTTCGGC TAAATCAGGA 
300
TCTGAAATAA CTCAACGGAA GGGGTTTGCA AGTAATCCTA AACAAGGCTC 
350
GATGACTGGA TTTCCGAATA TTCACTTTGC TCCTGCACAG GCTAATTTCT 
400
CATTTCACTA TGCTGATCCA CATTATGGTG GTTTATTAGC TGCAACTTAC 
450
CTACCACAGG CACCAACATG CAATCCTCAA ATGGTGAGTA TGATTCCTGG 
500
TCGTGTTCCT TTACCAGCAG AGCTCACAGA AACTGATCCA GTCTTTGTCA 
550
ATGCGAAGCA ATACCACGCA ATTATGAGGA GGAGACAGCA ACGTGCTAAG 
600
CTTGAGGCTC AAAACAAACT AATCAGAGCC CGTAAGCCCT ATCTTCATGA 
650
GTCTCGACAT GTTCATGCTC TTAAAAGGCC AAGAGGATCT GGTGGAAGAT 
700
TCCTAAACAC CAAAAAACTT CTTCAAGAAT CCGAACAGGC TGCTGCTAGA 
750
GAACAAGAAC AGGACAAGTT AGGCCAACAG GTAAACAGAA AGACCAACAT 
800
GTCTAGATTC GAAGCTCATA TGCTGCAGAA CAACAAAGAC CGCAGCTCAA 
850
CCACTTCTGG CTCAGACATC ACCTCTGTTT CCGACGGTGC TGATATCTTT 
900
GGACACACTG AATTCCAGTT TTCAGGTTTC CCAACTCCGA TAAACCGAGC 
950
CATGCTTGTT CATGGTCAGT CTAATGACAT GCATGGAGGT GGAGACATGC 
1000
ACCATTTCTC TGTCCATATC TGA
1050

>AT1G72830.1 longest ORF length:340
MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS 
50
RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG 
100
SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY 
150
LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK 
200
LEAQNKLIRA RKPYLHESRH VHALKRPRGS GGRFLNTKKL LQESEQAAAR 
250
EQEQDKLGQQ VNRKTNMSRF EAHMLQNNKD RSSTTSGSDI TSVSDGADIF 
300
GHTEFQFSGF PTPINRAMLV HGQSNDMHGG GDMHHFSVHI 
350