fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72830 NF-YA3, ATHAP2C, HAP2C "nuclear factor Y, subunit A3", nuclear factor Y, subunit A3 (.1.2.3)

>AT1G72830.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, NcoI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 913
EcoRV GAT|ATC 895
HindIII A|AGCTT 132, 598
KpnI GGTAC|C 636
NdeI CA|TATG 820
PstI CTGCA|G 826
SacI GAGCT|C 520
XbaI T|CTAGA 805


Click here to view TAIR data

>AT1G72830.2 length:1026
ATGATGCATC AGATGTTGAA TAAGAAAGAT TCAGCTACTC ATTCCACTTT 
50
GCCATACCTT AATACTAGCA TCTCTTGGGG AGTGGTTCCA ACTGATTCCG 
100
TTGCTAATCG TCGCGGTTCT GCTGAATCAC TAAGCTTGAA GGTTGATTCA 
150
AGACCTGGGC ATATACAAAC TACAAAGCAA ATCAGTTTTC AGGACCAAGA 
200
TTCATCTTCA ACACAGTCCA CTGGTCAATC TTATACTGAA GTTGCTAGTA 
250
GTGGTGATGA TAATCCTTCC AGACAAATCT CCTTTTCGGC TAAATCAGGA 
300
TCTGAAATAA CTCAACGGAA GGGGTTTGCA AGTAATCCTA AACAAGGCTC 
350
GATGACTGGA TTTCCGAATA TTCACTTTGC TCCTGCACAG GCTAATTTCT 
400
CATTTCACTA TGCTGATCCA CATTATGGTG GTTTATTAGC TGCAACTTAC 
450
CTACCACAGG CACCAACATG CAATCCTCAA ATGGTGAGTA TGATTCCTGG 
500
TCGTGTTCCT TTACCAGCAG AGCTCACAGA AACTGATCCA GTCTTTGTCA 
550
ATGCGAAGCA ATACCACGCA ATTATGAGGA GGAGACAGCA ACGTGCTAAG 
600
CTTGAGGCTC AAAACAAACT AATCAGAGCC CGTAAGGTAC CCTATCTTCA 
650
TGAGTCTCGA CATGTTCATG CTCTTAAAAG GCCAAGAGGA TCTGGTGGAA 
700
GATTCCTAAA CACCAAAAAA CTTCTTCAAG AATCCGAACA GGCTGCTGCT 
750
AGAGAACAAG AACAGGACAA GTTAGGCCAA CAGGTAAACA GAAAGACCAA 
800
CATGTCTAGA TTCGAAGCTC ATATGCTGCA GAACAACAAA GACCGCAGCT 
850
CAACCACTTC TGGCTCAGAC ATCACCTCTG TTTCCGACGG TGCTGATATC 
900
TTTGGACACA CTGAATTCCA GTTTTCAGGT TTCCCAACTC CGATAAACCG 
950
AGCCATGCTT GTTCATGGTC AGTCTAATGA CATGCATGGA GGTGGAGACA 
1000
TGCACCATTT CTCTGTCCAT ATCTGA
1050

>AT1G72830.2 longest ORF length:341
MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS 
50
RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG 
100
SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY 
150
LPQAPTCNPQ MVSMIPGRVP LPAELTETDP VFVNAKQYHA IMRRRQQRAK 
200
LEAQNKLIRA RKVPYLHESR HVHALKRPRG SGGRFLNTKK LLQESEQAAA 
250
REQEQDKLGQ QVNRKTNMSR FEAHMLQNNK DRSSTTSGSD ITSVSDGADI 
300
FGHTEFQFSG FPTPINRAML VHGQSNDMHG GGDMHHFSVH I
350