Locus |
Common name |
Short description |
AT1G72830 |
NF-YA3, ATHAP2C, HAP2C |
"nuclear factor Y, subunit A3", nuclear factor Y, subunit A3 (.1.2.3) |
>AT1G72830.3 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRI
| G|AATTC |
835 |
EcoRV
| GAT|ATC |
817 |
HindIII
| A|AGCTT |
132, 523 |
NdeI
| CA|TATG |
742 |
PstI
| CTGCA|G |
748 |
XbaI
| T|CTAGA |
727 |
Click here to view TAIR data
>AT1G72830.3 length:948
ATGATGCATC AGATGTTGAA TAAGAAAGAT TCAGCTACTC ATTCCACTTT | 50 |
GCCATACCTT AATACTAGCA TCTCTTGGGG AGTGGTTCCA ACTGATTCCG | 100 |
TTGCTAATCG TCGCGGTTCT GCTGAATCAC TAAGCTTGAA GGTTGATTCA | 150 |
AGACCTGGGC ATATACAAAC TACAAAGCAA ATCAGTTTTC AGGACCAAGA | 200 |
TTCATCTTCA ACACAGTCCA CTGGTCAATC TTATACTGAA GTTGCTAGTA | 250 |
GTGGTGATGA TAATCCTTCC AGACAAATCT CCTTTTCGGC TAAATCAGGA | 300 |
TCTGAAATAA CTCAACGGAA GGGGTTTGCA AGTAATCCTA AACAAGGCTC | 350 |
GATGACTGGA TTTCCGAATA TTCACTTTGC TCCTGCACAG GCTAATTTCT | 400 |
CATTTCACTA TGCTGATCCA CATTATGGTG GTTTATTAGC TGCAACTTAC | 450 |
CTACCACAGG CACCAACATG CAATCCTCAA ATGCAATACC ACGCAATTAT | 500 |
GAGGAGGAGA CAGCAACGTG CTAAGCTTGA GGCTCAAAAC AAACTAATCA | 550 |
GAGCCCGTAA GCCCTATCTT CATGAGTCTC GACATGTTCA TGCTCTTAAA | 600 |
AGGCCAAGAG GATCTGGTGG AAGATTCCTA AACACCAAAA AACTTCTTCA | 650 |
AGAATCCGAA CAGGCTGCTG CTAGAGAACA AGAACAGGAC AAGTTAGGCC | 700 |
AACAGGTAAA CAGAAAGACC AACATGTCTA GATTCGAAGC TCATATGCTG | 750 |
CAGAACAACA AAGACCGCAG CTCAACCACT TCTGGCTCAG ACATCACCTC | 800 |
TGTTTCCGAC GGTGCTGATA TCTTTGGACA CACTGAATTC CAGTTTTCAG | 850 |
GTTTCCCAAC TCCGATAAAC CGAGCCATGC TTGTTCATGG TCAGTCTAAT | 900 |
GACATGCATG GAGGTGGAGA CATGCACCAT TTCTCTGTCC ATATCTGA | 950 |
>AT1G72830.3 longest ORF length:315
MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS | 50 |
RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG | 100 |
SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY | 150 |
LPQAPTCNPQ MQYHAIMRRR QQRAKLEAQN KLIRARKPYL HESRHVHALK | 200 |
RPRGSGGRFL NTKKLLQESE QAAAREQEQD KLGQQVNRKT NMSRFEAHML | 250 |
QNNKDRSSTT SGSDITSVSD GADIFGHTEF QFSGFPTPIN RAMLVHGQSN | 300 |
DMHGGGDMHH FSVHI | 350 |
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