fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G72830 NF-YA3, ATHAP2C, HAP2C "nuclear factor Y, subunit A3", nuclear factor Y, subunit A3 (.1.2.3)

>AT1G72830.3 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HpaI, KpnI, NcoI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
EcoRI G|AATTC 835
EcoRV GAT|ATC 817
HindIII A|AGCTT 132, 523
NdeI CA|TATG 742
PstI CTGCA|G 748
XbaI T|CTAGA 727


Click here to view TAIR data

>AT1G72830.3 length:948
ATGATGCATC AGATGTTGAA TAAGAAAGAT TCAGCTACTC ATTCCACTTT 
50
GCCATACCTT AATACTAGCA TCTCTTGGGG AGTGGTTCCA ACTGATTCCG 
100
TTGCTAATCG TCGCGGTTCT GCTGAATCAC TAAGCTTGAA GGTTGATTCA 
150
AGACCTGGGC ATATACAAAC TACAAAGCAA ATCAGTTTTC AGGACCAAGA 
200
TTCATCTTCA ACACAGTCCA CTGGTCAATC TTATACTGAA GTTGCTAGTA 
250
GTGGTGATGA TAATCCTTCC AGACAAATCT CCTTTTCGGC TAAATCAGGA 
300
TCTGAAATAA CTCAACGGAA GGGGTTTGCA AGTAATCCTA AACAAGGCTC 
350
GATGACTGGA TTTCCGAATA TTCACTTTGC TCCTGCACAG GCTAATTTCT 
400
CATTTCACTA TGCTGATCCA CATTATGGTG GTTTATTAGC TGCAACTTAC 
450
CTACCACAGG CACCAACATG CAATCCTCAA ATGCAATACC ACGCAATTAT 
500
GAGGAGGAGA CAGCAACGTG CTAAGCTTGA GGCTCAAAAC AAACTAATCA 
550
GAGCCCGTAA GCCCTATCTT CATGAGTCTC GACATGTTCA TGCTCTTAAA 
600
AGGCCAAGAG GATCTGGTGG AAGATTCCTA AACACCAAAA AACTTCTTCA 
650
AGAATCCGAA CAGGCTGCTG CTAGAGAACA AGAACAGGAC AAGTTAGGCC 
700
AACAGGTAAA CAGAAAGACC AACATGTCTA GATTCGAAGC TCATATGCTG 
750
CAGAACAACA AAGACCGCAG CTCAACCACT TCTGGCTCAG ACATCACCTC 
800
TGTTTCCGAC GGTGCTGATA TCTTTGGACA CACTGAATTC CAGTTTTCAG 
850
GTTTCCCAAC TCCGATAAAC CGAGCCATGC TTGTTCATGG TCAGTCTAAT 
900
GACATGCATG GAGGTGGAGA CATGCACCAT TTCTCTGTCC ATATCTGA
950

>AT1G72830.3 longest ORF length:315
MMHQMLNKKD SATHSTLPYL NTSISWGVVP TDSVANRRGS AESLSLKVDS 
50
RPGHIQTTKQ ISFQDQDSSS TQSTGQSYTE VASSGDDNPS RQISFSAKSG 
100
SEITQRKGFA SNPKQGSMTG FPNIHFAPAQ ANFSFHYADP HYGGLLAATY 
150
LPQAPTCNPQ MQYHAIMRRR QQRAKLEAQN KLIRARKPYL HESRHVHALK 
200
RPRGSGGRFL NTKKLLQESE QAAAREQEQD KLGQQVNRKT NMSRFEAHML 
250
QNNKDRSSTT SGSDITSVSD GADIFGHTEF QFSGFPTPIN RAMLVHGQSN 
300
DMHGGGDMHH FSVHI
350