fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G73870 COL7 B-box type zinc finger protein with CCT domain (.1)

>AT1G73870.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
StyI C|C[AT][AT]GG 274


Click here to view TAIR data

>AT1G73870.1 length:1179
ATGGTGGTCG ATGTAGAGAG CCGAACCGCG AGCGTGACAG GAGAGAAGAT 
50
GGCGGCGCGT GGCTGTGATG CGTGCATGAA GAGATCACGT GCTAGTTGGT 
100
ACTGTCCAGC CGATGACGCT TTCCTATGCC AAAGCTGCGA CGCCTCGATC 
150
CACTCGGCTA ACCATTTAGC GAAACGGCAC GAACGTGTCC GGTTACAATC 
200
ATCTTCGCCG ACGGAGACGG CAGACAAAAC GACGTCGGTA TGGTACGAAG 
250
GATTCAGGAG AAAGGCGAGA ACGCCTAGGA GCAAGAGTTG TGCGTTTGAG 
300
AAGTTGTTGC AAATCGAGTC AAACGATCCT CTTGTTCCGG AGCTTGGTGG 
350
AGACGAAGAT GATGGCTTTT TCTCGTTCTC CTCCGTAGAA GAAACCGAGG 
400
AGAGTCTGAA TTGTTGCGTG CCTGTTTTCG ATCCTTTCTC AGACATGCTG 
450
ATTGATGATA TAAACGGCTT TTGCTTAGTT CCTGATGAAG TCAATAACAC 
500
TACTACTAAT GGAGAATTAG GAGAAGTCGA GAAGGCAATC ATGGACGATG 
550
AAGGTTTTAT GGGGTTCGTG CCATTGGATA TGGATCTTGA GGATCTCACT 
600
ATGGACGTGG AGAGTTTACT TGAGGAAGAA CAACTTTGCT TGGGATTCAA 
650
GGAACCAAAC GATGTTGGAG TCATCAAAGA AGAGAATAAA GTAGGGTTTG 
700
AGATTAATTG TAAGGATTTG AAGAGGGTGA AAGATGAAGA TGAAGAAGAA 
750
GAAGAAGCCA AGTGTGAAAA TGGAGGATCA AAGGATAGTG ATAGAGAAGC 
800
ATCAAATGAT AAAGATAGAA AGACAAGTTT GTTTCTGAGA TTAGATTATG 
850
GAGCTGTGAT TAGTGCTTGG GATAATCACG GTTCGCCGTG GAAAACCGGA 
900
ATCAAACCGG AGTGCATGTT GGGAGGGAAC ACGTGTCTGC CTCATGTTGT 
950
GGGTGGGTAC GAGAAATTGA TGTCGAGCGA CGGATCGGTG ACACGTCAGC 
1000
AAGGGAGAGA CGGAGGAGGA TCGGACGGGG AGAGAGAGGC GAGGGTTTTG 
1050
AGGTACAAGG AGAAGCGGAG GACGAGGTTG TTCTCAAAGA AAATAAGATA 
1100
TGAGGTTCGG AAACTTAACG CTGAGCAGAG ACCTCGAATC AAAGGTCGTT 
1150
TCGTGAAGAG GACGTCACTT TTGACGTGA
1200

>AT1G73870.1 longest ORF length:392
MVVDVESRTA SVTGEKMAAR GCDACMKRSR ASWYCPADDA FLCQSCDASI 
50
HSANHLAKRH ERVRLQSSSP TETADKTTSV WYEGFRRKAR TPRSKSCAFE 
100
KLLQIESNDP LVPELGGDED DGFFSFSSVE ETEESLNCCV PVFDPFSDML 
150
IDDINGFCLV PDEVNNTTTN GELGEVEKAI MDDEGFMGFV PLDMDLEDLT 
200
MDVESLLEEE QLCLGFKEPN DVGVIKEENK VGFEINCKDL KRVKDEDEEE 
250
EEAKCENGGS KDSDREASND KDRKTSLFLR LDYGAVISAW DNHGSPWKTG 
300
IKPECMLGGN TCLPHVVGGY EKLMSSDGSV TRQQGRDGGG SDGEREARVL 
350
RYKEKRRTRL FSKKIRYEVR KLNAEQRPRI KGRFVKRTSL LT
400