fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G74840 Homeodomain-like superfamily protein (.1.2)

>AT1G74840.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HindIII, HpaI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 460
KpnI GGTAC|C 618
NcoI C|CATGG 289, 500
PstI CTGCA|G 328
SpeI A|CTAGT 16
StyI C|C[AT][AT]GG 289, 500


Click here to view TAIR data

>AT1G74840.1 length:798
ATGGCCGACG GTAGTACTAG TTCTTCGGAG TCCACTACCG CCTGCGCTGG 
50
AAGCGGCACA AGAAGAGAGA TTATGCTGTT CGGAGTCAGG GTTGTGCTTG 
100
ACCCGATGAG AAAGTGCGTG AGTTTGAACA ATCTGTCTGA CTATGAACAG 
150
ACGGCGGAGA CTCCAAAGAT CGACGGCGAA GATAGAGATG AACAAGATAT 
200
GAACAAAACC CCGGCCGGTT ACGCCTCGGC GGATGAAGCT CTTCCCATGT 
250
CTTCTTCTAA CGGCAAAATC GAGAGGAAAC GAGGAGTTCC ATGGACTGAA 
300
GAAGAACACA AGCTGTTCTT GCTTGGGCTG CAGAGAGTCG GTAAAGGAGA 
350
TTGGAAAGGA ATATCAAGAA ACTTTGTCAA GACCAGAACC TCTACACAAG 
400
TTGCTAGTCA TGCTCAGAAA TACTTCCTCA GGCGAAGTAA TCTTAACCGT 
450
CGCCGCCGAA GATCTAGCCT TTTTGACATG ACTACTGATA CGGTCATACC 
500
CATGGAAGAA GATCACCAAG TGCTTATACA GGAGAACACA TCTCAATCAT 
550
CTTCTCCTGT ACCGGAAATC AACAACTTCT CTATACATCC GGTTATGCAA 
600
GTCTTTCCCG AGTTCCCGGT ACCAACAGGG AATCAATCAT ACGGACAGCT 
650
TACTTCATCG AATCTCATCA ATTTGGTTCC ATTAACTTTT CAGTCAAGTC 
700
CAGCACCGCT TTCTCTCAAC CTCTCACTAG CTTCATCTAA TCTTAATGAA 
750
CCATCTCCTT CAATGCATCC AGCATTCAAC ACGATTGGAG TCGCTTAG
800

>AT1G74840.1 longest ORF length:265
MADGSTSSSE STTACAGSGT RREIMLFGVR VVLDPMRKCV SLNNLSDYEQ 
50
TAETPKIDGE DRDEQDMNKT PAGYASADEA LPMSSSNGKI ERKRGVPWTE 
100
EEHKLFLLGL QRVGKGDWKG ISRNFVKTRT STQVASHAQK YFLRRSNLNR 
150
RRRRSSLFDM TTDTVIPMEE DHQVLIQENT SQSSSPVPEI NNFSIHPVMQ 
200
VFPEFPVPTG NQSYGQLTSS NLINLVPLTF QSSPAPLSLN LSLASSNLNE 
250
PSPSMHPAFN TIGVA
300