fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G74930 ORA47, ERF018 Integrase-type DNA-binding superfamily protein (.1)

>AT1G74930.1 CDS map

>>Show genomic map




Uncut enzymes: AatII, Acc65I, AccI, AclI, AfeI, AflII, AflIII, AgeI, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BalI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BslI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BsrI, BssHII, BssSI, BstBI, BstEII, BstF5I, BstNI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cfr10I, DdeI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HindIII, HpaI, HphI, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIII, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflMI, PleI, PmeI, PmlI, PpuMI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsrII, SacI, SalI, SapI, Sau96I, SbfI, ScaI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TliI, Tsp45I, TspRI, XbaI, XcmI, XhoI, XmaI, XmnI
Name Recognition sequence Cut positions
AccII(FnuDII) CG|CG 168, 200
AccIII(BspMII) T|CCGGA 273
AciI C|CGC 183, 199
AluI AG|CT 286
ApoI Pu|AATTPy 131, 453
AvaI C|PyCGPuG 157
BamHI G|GATCC 358
BfaI C|TAG 294
BsaHI GPu|CGPyC 181, 267
BsaJI C|CNNGG 201
BsaWI [AT]|CCGG[AT] 273, 496
BsoBI C|PyCGPuG 157
BspDI AT|CGAT 506
BspEI T|CCGGA 273
BssKI |CCNGG 354
BstAPI GCANNNN|NTGC 399
BstUI CG|CG 168, 200
BstYI Pu|GATCPy 358, 365
BtgI C|CPuPyGG 201
Cac8I GCN|NGC 9, 171
ClaI AT|CGAT 506
DpnI GA-CH3|TC 103, 244, 357, 364, 503
DpnII |GATC 103, 244, 357, 364, 503
Fnu4HI GC|NGC 165, 183, 202, 288
HhaI GCG|C 167
HinP1I G|CGC 167
HincII GTPy|PuAC 264
HinfI G|ANTC 278, 298, 339, 375, 465, 561, 569
HpaII C|CGG 272, 354, 495
Hpy188I TCN|GA 99, 106, 360, 367, 446, 474
Hpy99I CG[AT]CG| 179, 241, 409, 476
HpyCH4III ACN|GT 239, 411
HpyCH4V TG|CA 48, 391
MboI |GATC 103, 244, 357, 364, 503
MslI CAPyNN|NNPuTG 46
MspA1I C[AC]G|C[GT]G 201
MspI C|CGG 272, 354, 495
MwoI GCNNNNN|NNGC 171, 300, 399
N.BstNBI GAGTCNNNN|N 380
NciI CC|[CG]GG 354
NlaIV GGN|NCC 358
PflFI GACN|NNGTC 322
PshAI GACNN|NNGTC 375
RsaI GT|AC 58, 350
SacII CCGC|GG 201
Sau3AI |GATC 103, 244, 357, 364, 503
ScrFI CC|NGG 354
Taqƒ¿I T|CGA 177, 242, 407, 505, 528
TfiI G|A[AT]TC 278, 298, 339, 465, 561, 569
TseI G|C[AT]GC 288
Tsp509I |AATT 130, 189, 215, 221, 452
Tth111I GACN|NNGTC 322


Click here to view TAIR data

>AT1G74930.1 length:588
ATGGTGAAGC AAGCGATGAA GGAAGAGGAG AAGAAGAGAA ACACGGCGAT 
50
GCAGTCAAAG TACAAAGGAG TGAGGAAGAG GAAATGGGGA AAATGGGTAT 
100
CGGAGATCAG ACTTCCACAC AGCAGAGAAC GAATTTGGTT AGGCTCTTAC 
150
GACACTCCCG AGAAGGCGGC GCGTGCTTTC GACGCCGCTC AATTTTGTCT 
200
CCGCGGCGGC GATGCTAATT TCAATTTCCC TAATAATCCA CCGTCGATCT 
250
CCGTAGAAAA GTCGTTGACG CCTCCGGAGA TTCAGGAAGC TGCTGCTAGA 
300
TTCGCTAACA CATTCCAAGA CATTGTCAAG GGAGAAGAAG AATCGGGTTT 
350
AGTACCCGGA TCCGAGATCC GACCAGAGTC TCCTTCTACA TCTGCATCTG 
400
TTGCTACATC GACGGTGGAT TATGATTTTT CGTTTTTGGA TTTGCTTCCG 
450
ATGAATTTCG GGTTTGATTC CTTCTCCGAC GACTTCTCTG GCTTCTCCGG 
500
TGGTGATCGA TTTACAGAGA TTTTACCCAT CGAAGATTAC GGAGGAGAGA 
550
GTTTATTAGA TGAATCTTTG ATTCTTTGGG ATTTTTGA
600

>AT1G74930.1 longest ORF length:195
MVKQAMKEEE KKRNTAMQSK YKGVRKRKWG KWVSEIRLPH SRERIWLGSY 
50
DTPEKAARAF DAAQFCLRGG DANFNFPNNP PSISVEKSLT PPEIQEAAAR 
100
FANTFQDIVK GEEESGLVPG SEIRPESPST SASVATSTVD YDFSFLDLLP 
150
MNFGFDSFSD DFSGFSGGDR FTEILPIEDY GGESLLDESL ILWDF
200