fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G75080 BZR1 BRASSINAZOLE-RESISTANT 1, Brassinosteroid signalling positive regulator (BZR1) family protein (.1), Brassinosteroid signalling positive regulator (BZR1) family protein (.2)

>AT1G75080.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AciI, AclI, AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BamHI, BbsI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BstBI, BstEII, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MslI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PvuI, RsrII, SacII, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tsp45I, Tth111I, XbaI, XcmI, XmaI, XmnI
Name Recognition sequence Cut positions
AccI GT|[AC][TG]AC 21
AccII(FnuDII) CG|CG 419
AflIII A|CPuPyGT 440
AgeI A|CCGGT 534
AluI AG|CT 13, 31, 37, 121, 127, 154, 208, 223, 292, 761, 893, 975
AlwNI CAGNNN|CTG 32
ApoI Pu|AATTPy 907
AvaI C|PyCGPuG 308, 408
BalI TGG|CCA 605
BanI G|GPyPuCC 807
BanII GPuGCPy|C 155, 339
BbvCI CC|TCAGC 848
BfaI C|TAG 666
BlpI GC|TNAGC 593
BsaHI GPu|CGPyC 627
BsaJI C|CNNGG 602, 698, 931
BsaWI [AT]|CCGG[AT] 534
BsiHKAI G[AT]GC[AT]|C 155
BslI CCNNNNN|NNGG 282, 420, 936
BsoBI C|PyCGPuG 308, 408
Bsp1286I G[GAT]GC[CAT]|C 155, 339
BspT107I(HgiCI) G|G[TC][AG]CC 807
BsrFI Pu|CCGGPy 534
BsrI ACTGGN| 145, 578
BssKI |CCNGG 282, 698, 931
BssSI C|TCGTG 1001
BstAPI GCANNNN|NTGC 268
BstF5I GGATGNN| 10, 269
BstNI CC|[AT]GG 282, 931
BstUI CG|CG 419
BstXI CCANNNNN|NTGG 885
BstYI Pu|GATCPy 969
BtgI C|CPuPyGG 602
Cac8I GCN|NGC 272
Cfr10I [AG]|CCGG[TC] 534
DdeI C|TNAG 150, 465, 501, 553, 592, 847, 898
DpnI GA-CH3|TC 968
DpnII |GATC 968
DraI TTT|AAA 904
EaeI Py|GGCCPu 605
Fnu4HI GC|NGC 30, 36, 42, 48, 54, 129, 870
HaeIII GG|CC 604
HhaI GCG|C 842
HinP1I G|CGC 842
HincII GTPy|PuAC 21
HindIII A|AGCTT 762
HinfI G|ANTC 410, 505, 582, 723, 729, 744
HpaII C|CGG 533, 698
Hpy188I TCN|GA 6, 98, 466, 502, 671, 726, 767, 897
Hpy99I CG[AT]CG| 19, 73
HpyCH4III ACN|GT 514, 566, 738
HpyCH4IV A|CGT 17
HpyCH4V TG|CA 34, 269, 658, 775
MboI |GATC 968
MscI TGG|CCA 605
MseI T|TAA 204, 633, 903, 924
MspA1I C[AC]G|C[GT]G 32, 38, 56
MspI C|CGG 533, 698
MwoI GCNNNNN|NNGC 36, 48, 129, 268, 657
N.BstNBI GAGTCNNNN|N 415, 728
NciI CC|[CG]GG 698
NcoI C|CATGG 602
NlaIII CATG| 439, 601, 950
NlaIV GGN|NCC 807
NspI PuCATG|Py 440
PaeR7I C|TCGAG 308
PciI A|CATGT 440
PsiI TTA|TAA 168
PspGI |CC[AT]GG 282, 931
PstI CTGCA|G 35
PvuII CAG|CTG 32, 38
RsaI GT|AC 249
SacI GAGCT|C 155
SalI G|TCGAC 21
Sau3AI |GATC 968
ScrFI CC|NGG 282, 698, 931
SexAI A|CC[AT]GGT 283
SfcI C|TPuPyAG 35, 125
SmlI C|TPyPuAG 158, 308, 973
StyI C|C[AT][AT]GG 602
Taqƒ¿I T|CGA 20, 307
TfiI G|A[AT]TC 505, 582, 744
TliI C|TCGAG 308
TseI G|C[AT]GC 30, 36, 51, 129, 870
Tsp509I |AATT 170, 635, 906
TspRI NNCA[CG]TGNN| 145, 739
XhoI C|TCGAG 308


Click here to view TAIR data

>AT1G75080.1 length:1011
ATGACTTCGG ATGGAGCTAC GTCGACATCA GCAGCTGCAG CTGCGGCGGC 
50
GGCAGCAGCG GCGAGGAGGA AGCCGTCGTG GAGAGAAAGG GAGAATAATC 
100
GGAGGAGAGA AAGACGGAGA AGAGCTGTAG CTGCGAAGAT ATACACTGGG 
150
CTTAGAGCTC AAGGTGATTA TAATTTGCCT AAACATTGTG ATAATAATGA 
200
AGTCCTTAAA GCTCTTTGTG TTGAAGCTGG TTGGGTTGTT GAAGAAGATG 
250
GTACTACTTA TCGCAAGGGA TGCAAGCCTT TACCTGGTGA GATAGCTGGG 
300
ACTTCATCTC GAGTAACTCC ATATTCATCA CAGAACCAGA GCCCTCTTTC 
350
ATCAGCCTTT CAAAGTCCCA TCCCATCTTA CCAAGTTAGC CCGTCTTCTT 
400
CATCATTCCC GAGTCCTTCT CGCGGTGAAC CAAATAACAA CATGTCCTCT 
450
ACATTCTTCC CTTTCCTCAG AAATGGTGGC ATTCCTTCTT CTCTTCCTTC 
500
CCTCAGAATC TCAAACAGTT GTCCAGTTAC CCCACCGGTC TCATCGCCGA 
550
CTTCTAAGAA CCCGAAACCG TTGCCTAACT GGGAATCTAT CGCTAAGCAA 
600
TCCATGGCCA TTGCTAAACA ATCAATGGCG TCTTTTAATT ATCCTTTCTA 
650
TGCGGTTTCT GCACCTGCTA GTCCGACACA TCGCCACCAG TTTCATACCC 
700
CGGCTACTAT ACCTGAATGT GATGAGTCTG ACTCTTCCAC TGTTGATTCT 
750
GGTCATTGGA TAAGCTTTCA GAAGTTTGCA CAACAACAGC CATTCTCTGC 
800
CTCTATGGTG CCAACCTCTC CTACCTTCAA TCTTGTGAAA CCTGCGCCTC 
850
AGCAGATGTC TCCAAATACT GCTGCCTTCC AAGAGATTGG TCAAAGCTCT 
900
GAGTTTAAAT TTGAGAATAG CCAAGTTAAA CCCTGGGAAG GAGAGAGGAT 
950
ACATGATGTG GGTATGGAGG ATCTTGAGCT TACACTTGGA AATGGGAAGG 
1000
CTCGTGGTTG A
1050

>AT1G75080.1 longest ORF length:336
MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG 
50
LRAQGDYNLP KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG 
100
TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS 
150
TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ 
200
SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS 
250
GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS 
300
EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG
350