Locus |
Common name |
Short description |
AT1G75080 |
BZR1 |
BRASSINAZOLE-RESISTANT 1, Brassinosteroid signalling positive regulator (BZR1) family protein (.1), Brassinosteroid signalling positive regulator (BZR1) family protein (.2) |
>AT1G75080.2 CDS map
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Uncut enzymes: AatII, Acc65I, AccIII(BspMII), AciI, AclI, AfeI, AflII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaII, AvrII, BaeI, BamHI, BbsI, BbvI, BcgI, BciVI, BclI, BglI, BglII, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BspDI, BspEI, BspHI, BspMI, BsrBI, BsrDI, BsrGI, BssHII, BstBI, BstEII, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraIII, DrdI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MslI, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PvuI, RsrII, SacII, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, Tsp45I, Tth111I, XbaI, XcmI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AccI
| GT|[AC][TG]AC |
21 |
AccII(FnuDII)
| CG|CG |
419 |
AflIII
| A|CPuPyGT |
440 |
AgeI
| A|CCGGT |
534 |
AluI
| AG|CT |
13, 31, 37, 121, 127, 154, 208, 223, 292, 761, 893, 975 |
AlwNI
| CAGNNN|CTG |
32 |
ApoI
| Pu|AATTPy |
907 |
AvaI
| C|PyCGPuG |
308, 408 |
BalI
| TGG|CCA |
605 |
BanI
| G|GPyPuCC |
807 |
BanII
| GPuGCPy|C |
155, 339 |
BbvCI
| CC|TCAGC |
848 |
BfaI
| C|TAG |
666 |
BlpI
| GC|TNAGC |
593 |
BsaHI
| GPu|CGPyC |
627 |
BsaJI
| C|CNNGG |
602, 698, 931 |
BsaWI
| [AT]|CCGG[AT] |
534 |
BsiHKAI
| G[AT]GC[AT]|C |
155 |
BslI
| CCNNNNN|NNGG |
282, 420, 936 |
BsoBI
| C|PyCGPuG |
308, 408 |
Bsp1286I
| G[GAT]GC[CAT]|C |
155, 339 |
BspT107I(HgiCI)
| G|G[TC][AG]CC |
807 |
BsrFI
| Pu|CCGGPy |
534 |
BsrI
| ACTGGN| |
145, 578 |
BssKI
| |CCNGG |
282, 698, 931 |
BssSI
| C|TCGTG |
1001 |
BstAPI
| GCANNNN|NTGC |
268 |
BstF5I
| GGATGNN| |
10, 269 |
BstNI
| CC|[AT]GG |
282, 931 |
BstUI
| CG|CG |
419 |
BstXI
| CCANNNNN|NTGG |
885 |
BstYI
| Pu|GATCPy |
969 |
BtgI
| C|CPuPyGG |
602 |
Cac8I
| GCN|NGC |
272 |
Cfr10I
| [AG]|CCGG[TC] |
534 |
DdeI
| C|TNAG |
150, 465, 501, 553, 592, 847, 898 |
DpnI
| GA-CH3|TC |
968 |
DpnII
| |GATC |
968 |
DraI
| TTT|AAA |
904 |
EaeI
| Py|GGCCPu |
605 |
Fnu4HI
| GC|NGC |
30, 36, 42, 48, 54, 129, 870 |
HaeIII
| GG|CC |
604 |
HhaI
| GCG|C |
842 |
HinP1I
| G|CGC |
842 |
HincII
| GTPy|PuAC |
21 |
HindIII
| A|AGCTT |
762 |
HinfI
| G|ANTC |
410, 505, 582, 723, 729, 744 |
HpaII
| C|CGG |
533, 698 |
Hpy188I
| TCN|GA |
6, 98, 466, 502, 671, 726, 767, 897 |
Hpy99I
| CG[AT]CG| |
19, 73 |
HpyCH4III
| ACN|GT |
514, 566, 738 |
HpyCH4IV
| A|CGT |
17 |
HpyCH4V
| TG|CA |
34, 269, 658, 775 |
MboI
| |GATC |
968 |
MscI
| TGG|CCA |
605 |
MseI
| T|TAA |
204, 633, 903, 924 |
MspA1I
| C[AC]G|C[GT]G |
32, 38, 56 |
MspI
| C|CGG |
533, 698 |
MwoI
| GCNNNNN|NNGC |
36, 48, 129, 268, 657 |
N.BstNBI
| GAGTCNNNN|N |
415, 728 |
NciI
| CC|[CG]GG |
698 |
NcoI
| C|CATGG |
602 |
NlaIII
| CATG| |
439, 601, 950 |
NlaIV
| GGN|NCC |
807 |
NspI
| PuCATG|Py |
440 |
PaeR7I
| C|TCGAG |
308 |
PciI
| A|CATGT |
440 |
PsiI
| TTA|TAA |
168 |
PspGI
| |CC[AT]GG |
282, 931 |
PstI
| CTGCA|G |
35 |
PvuII
| CAG|CTG |
32, 38 |
RsaI
| GT|AC |
249 |
SacI
| GAGCT|C |
155 |
SalI
| G|TCGAC |
21 |
Sau3AI
| |GATC |
968 |
ScrFI
| CC|NGG |
282, 698, 931 |
SexAI
| A|CC[AT]GGT |
283 |
SfcI
| C|TPuPyAG |
35, 125 |
SmlI
| C|TPyPuAG |
158, 308, 973 |
StyI
| C|C[AT][AT]GG |
602 |
Taqƒ¿I
| T|CGA |
20, 307 |
TfiI
| G|A[AT]TC |
505, 582, 744 |
TliI
| C|TCGAG |
308 |
TseI
| G|C[AT]GC |
30, 36, 51, 129, 870 |
Tsp509I
| |AATT |
170, 635, 906 |
TspRI
| NNCA[CG]TGNN| |
145, 739 |
XhoI
| C|TCGAG |
308 |
Click here to view TAIR data
>AT1G75080.2 length:1011
ATGACTTCGG ATGGAGCTAC GTCGACATCA GCAGCTGCAG CTGCGGCGGC | 50 |
GGCAGCAGCG GCGAGGAGGA AGCCGTCGTG GAGAGAAAGG GAGAATAATC | 100 |
GGAGGAGAGA AAGACGGAGA AGAGCTGTAG CTGCGAAGAT ATACACTGGG | 150 |
CTTAGAGCTC AAGGTGATTA TAATTTGCCT AAACATTGTG ATAATAATGA | 200 |
AGTCCTTAAA GCTCTTTGTG TTGAAGCTGG TTGGGTTGTT GAAGAAGATG | 250 |
GTACTACTTA TCGCAAGGGA TGCAAGCCTT TACCTGGTGA GATAGCTGGG | 300 |
ACTTCATCTC GAGTAACTCC ATATTCATCA CAGAACCAGA GCCCTCTTTC | 350 |
ATCAGCCTTT CAAAGTCCCA TCCCATCTTA CCAAGTTAGC CCGTCTTCTT | 400 |
CATCATTCCC GAGTCCTTCT CGCGGTGAAC CAAATAACAA CATGTCCTCT | 450 |
ACATTCTTCC CTTTCCTCAG AAATGGTGGC ATTCCTTCTT CTCTTCCTTC | 500 |
CCTCAGAATC TCAAACAGTT GTCCAGTTAC CCCACCGGTC TCATCGCCGA | 550 |
CTTCTAAGAA CCCGAAACCG TTGCCTAACT GGGAATCTAT CGCTAAGCAA | 600 |
TCCATGGCCA TTGCTAAACA ATCAATGGCG TCTTTTAATT ATCCTTTCTA | 650 |
TGCGGTTTCT GCACCTGCTA GTCCGACACA TCGCCACCAG TTTCATACCC | 700 |
CGGCTACTAT ACCTGAATGT GATGAGTCTG ACTCTTCCAC TGTTGATTCT | 750 |
GGTCATTGGA TAAGCTTTCA GAAGTTTGCA CAACAACAGC CATTCTCTGC | 800 |
CTCTATGGTG CCAACCTCTC CTACCTTCAA TCTTGTGAAA CCTGCGCCTC | 850 |
AGCAGATGTC TCCAAATACT GCTGCCTTCC AAGAGATTGG TCAAAGCTCT | 900 |
GAGTTTAAAT TTGAGAATAG CCAAGTTAAA CCCTGGGAAG GAGAGAGGAT | 950 |
ACATGATGTG GGTATGGAGG ATCTTGAGCT TACACTTGGA AATGGGAAGG | 1000 |
CTCGTGGTTG A | 1050 |
>AT1G75080.2 longest ORF length:336
MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG | 50 |
LRAQGDYNLP KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG | 100 |
TSSRVTPYSS QNQSPLSSAF QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS | 150 |
TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV SSPTSKNPKP LPNWESIAKQ | 200 |
SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC DESDSSTVDS | 250 |
GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS | 300 |
EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG | 350 |
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