Locus |
Common name |
Short description |
AT1G75250 |
RSM3, ATRL6 |
RADIALIS-LIKE SANT/MYB 3, RAD-like 6 (.1.2) |
>AT1G75250.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BlpI, BmrI, BpmI, BsaAI, BsaBI, BsaI, BsaWI, BsaXI, BseRI, BsgI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssKI, BssSI, BstAPI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, Cac8I, Cfr10I, ClaI, DdeI, DraI, EaeI, EagI, EarI, EciI, EcoNI, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HgaI, HincII, HindIII, HpaI, HpaII, HphI, HpyCH4V, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, MspI, MwoI, N.BstNBI, NaeI, , NarI, NciI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspGI, PspOMI, PstI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, ScrFI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, SwaI, TliI, TseI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
Name |
Recognition sequence |
Cut positions |
AhdI
| GACNNN|NNGTC |
41 |
AluI
| AG|CT |
118 |
ApoI
| Pu|AATTPy |
279 |
BglII
| A|GATCT |
287 |
BsaHI
| GPu|CGPyC |
3 |
BsaJI
| C|CNNGG |
31, 68 |
BsiEI
| CGPuPy|CG |
96 |
BslI
| CCNNNNN|NNGG |
100 |
BsrI
| ACTGGN| |
196 |
BstBI
| TT|CGAA |
229 |
BstYI
| Pu|GATCPy |
177, 287 |
BtgI
| C|CPuPyGG |
31 |
DpnI
| GA-CH3|TC |
176, 286 |
DpnII
| |GATC |
176, 286 |
DraIII
| CACNNN|GTG |
109 |
DrdI
| GACNNNN|NNGTC |
169 |
EcoO109I
| PuG|GNCCPy |
65 |
HaeII
| PuGCGC|Py |
152 |
HaeIII
| GG|CC |
64 |
HhaI
| GCG|C |
151 |
HinP1I
| G|CGC |
151 |
HinfI
| G|ANTC |
231 |
Hpy188I
| TCN|GA |
124 |
Hpy99I
| CG[AT]CG| |
170 |
HpyCH4III
| ACN|GT |
135 |
HpyCH4IV
| A|CGT |
35 |
MboI
| |GATC |
176, 286 |
NcoI
| C|CATGG |
31 |
NlaIII
| CATG| |
30 |
Sau3AI
| |GATC |
176, 286 |
Sau96I
| G|GNCC |
64 |
SfcI
| C|TPuPyAG |
137 |
SmlI
| C|TPyPuAG |
12, 240 |
StyI
| C|C[AT][AT]GG |
31, 68 |
Taqƒ¿I
| T|CGA |
57, 171, 189, 228 |
TfiI
| G|A[AT]TC |
231 |
Tsp509I
| |AATT |
215, 278 |
Click here to view TAIR data
>AT1G75250.2 length:294
ATGGCGTCAA ACTCAAGAAG TTCAATCTCA CCATGGACGT TTAGTCAAAA | 50 |
CAAGATGTTC GAGAGGGCCT TGGCAGTTTA CGACAAGGAC ACACCCGACC | 100 |
GATGGCACAA TGTGGCAAAA GCTGTCGGAG GGAAAACTGT AGAAGAAGTG | 150 |
AAGCGCCACT ATGACATTCT CGTCGAGGAT CTCATCAACA TCGAGACTGG | 200 |
TCGTGTCCCT TTGCCCAATT ACAAGACCTT CGAATCTAAC TCAAGAAGCA | 250 |
TCAATGACTT TGACACAAGG AAAATGAAGA ATTTGAAGAT CTAA | 300 |
>AT1G75250.2 longest ORF length:97
MASNSRSSIS PWTFSQNKMF ERALAVYDKD TPDRWHNVAK AVGGKTVEEV | 50 |
KRHYDILVED LINIETGRVP LPNYKTFESN SRSINDFDTR KMKNLKI | 100 |
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