fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G75340 Zinc finger C-x8-C-x5-C-x3-H type family protein (.1.2)

>AT1G75340.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HpaI, KpnI, NcoI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 430
HindIII A|AGCTT 747, 825, 918
NdeI CA|TATG 461


Click here to view TAIR data

>AT1G75340.1 length:1308
ATGAGGAAGG AACTGTGTAG AAACTTTCAG CGTGGCAGTT GTAGGTATGG 
50
GGAAAACTGT AGATTTCTTC ATCCACAACA AGCTAAGCCA AATAATCCCT 
100
TTGGCTTTGG TACACAAAAC CAACAACAAC AACAGCAGCA GCAGCAACAA 
150
AATAGTTCGA ACCCTTTTGG ATTTGGTGTA CAAAGTGGTG GTTCCAGCAG 
200
ACCGAATCAG TTCCAGAATA CTTGGTCACG AACGGCTTCT ACACCTACTG 
250
GTGGTGGTGC TGCTGCTTCT ACACAGCAGA CTGGTAAACA GACGCAGCCG 
300
GCAGATCATA AATGCACAGA TCCTGCTGCG TGTAAGCGGG TAATGCAAGA 
350
CGATTTTAAG AATGAGAGAC CCATGTGGAA GCTCACATGC TACGGCCACT 
400
GGAAATATTT TCCATGTGAT GTTACCGGTG ATATCAGCTA TGAAGAACTA 
450
CGTGCAGTGG CATATGAAGA AGCTAAACGA GGAATACCTC TACAGTCGAT 
500
TGTTGAAAGG GAGAGGAATC TGCAAAATTC CAAAATAGCC GAGTTTGAAA 
550
ACTTTCTACG GAATCCATAC AAAGGCTCTG TTACCGCCAA TCAAAGCCCG 
600
TTTGCTGCAA CCACTCCTAG TATCTTCCCT CAGTCCAGTC AGATCAATTC 
650
CCCTTCTCCA GCATTCTCTG GCTTTAATCA ACAAACTGCA TTCTCCAATA 
700
CCAATGCGGG TGGACTCAGT TCATCTGGAC CTCCGAATGC CTTTGCAAGC 
750
TTCAATCAAC AAACTACATT CCCCAATACC AATGCTGGTG GAGTCAGTTC 
800
ATCTGGACCT CCGAACCCCT TTGCAAGCTT TACTCAACAA TCAAATAATC 
850
AACAAACTGC ATTCTCCAAT ACCAACGCTG GTGGTCTCAG TTCATCTGGA 
900
CCTCCGAATG CCTTTGCAAG CTTTAATAAA CAACCAAATG CTTTCAGCGT 
950
CAACACTCCT CAACCTGTTC CTTCAGGTCC CTCTGGTTTC CAAACCAATC 
1000
CATCAACAAC ATTCAAACCA GCATCATTTG GACCTGGACC CGGATTTGCC 
1050
ACAACTCCAC AAAACAATAA CATCTTTGGT CAATCAACTC CAACACCGGC 
1100
TACAAACACT TCCCAGAACA ATCAGACCGC ATTCAACTTC AATGTCCCTG 
1150
TTGCATCTTT TACTGCTCCT GCTATAAACA CGACAAATAC ATCTTCCGGA 
1200
ACCGAGCTGC AAATAGGTGG TGATCCTGTT GATAGTAGTA TCTGGCTAAA 
1250
GGAGAAATGG AATCCAGGGG AGATTCCGGA ACAAGCGCCG CCTGATGCCT 
1300
TTGTTTAA
1350

>AT1G75340.1 longest ORF length:435
MRKELCRNFQ RGSCRYGENC RFLHPQQAKP NNPFGFGTQN QQQQQQQQQQ 
50
NSSNPFGFGV QSGGSSRPNQ FQNTWSRTAS TPTGGGAAAS TQQTGKQTQP 
100
ADHKCTDPAA CKRVMQDDFK NERPMWKLTC YGHWKYFPCD VTGDISYEEL 
150
RAVAYEEAKR GIPLQSIVER ERNLQNSKIA EFENFLRNPY KGSVTANQSP 
200
FAATTPSIFP QSSQINSPSP AFSGFNQQTA FSNTNAGGLS SSGPPNAFAS 
250
FNQQTTFPNT NAGGVSSSGP PNPFASFTQQ SNNQQTAFSN TNAGGLSSSG 
300
PPNAFASFNK QPNAFSVNTP QPVPSGPSGF QTNPSTTFKP ASFGPGPGFA 
350
TTPQNNNIFG QSTPTPATNT SQNNQTAFNF NVPVASFTAP AINTTNTSSG 
400
TELQIGGDPV DSSIWLKEKW NPGEIPEQAP PDAFV
450