Locus |
Common name |
Short description |
AT1G75410 |
BLH3 |
BEL1-like homeodomain 3 (.1.2) |
>AT1G75410.2 CDS map
>>Show genomic map

Uncut enzymes: AatII, Acc65I, AccI, AccIII(BspMII), AclI, AfeI, AflII, AflIII, AgeI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvaII, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BglI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspEI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrFI, BsrGI, BssHII, BssSI, BstAPI, BstEII, BstZ17I, Bsu36I, BtgI, BtrI, BtsI, Cfr10I, ClaI, DraI, DraIII, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HhaI, HinP1I, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MluI, MlyI, MnlI, MscI, MslI, N.BstNBI, NaeI, , NarI, NciI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PsiI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, Sau96I, SbfI, ScaI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SspI, StuI, SwaI, TliI, Tsp45I, TspRI, Tth111I, XbaI, XcmI, XhoI, XmaI
Name |
Recognition sequence |
Cut positions |
AccII(FnuDII)
| CG|CG |
875, 880, 960, 1195 |
AciI
| C|CGC |
865, 959 |
AhdI
| GACNNN|NNGTC |
1335 |
AluI
| AG|CT |
88, 221, 271, 374, 693, 714, 775, 817, 838, 915, 1000, 1033, 1084, 1314, 1457 |
ApoI
| Pu|AATTPy |
407 |
BclI
| T|GATCA |
402, 905 |
BfaI
| C|TAG |
627, 1406 |
BglII
| A|GATCT |
508 |
BlpI
| GC|TNAGC |
821 |
BsaBI
| GATNN|NNATC |
1496 |
BsaJI
| C|CNNGG |
1512 |
BsaWI
| [AT]|CCGG[AT] |
130 |
BslI
| CCNNNNN|NNGG |
1050 |
BsrI
| ACTGGN| |
1444 |
BssKI
| |CCNGG |
1172 |
BstBI
| TT|CGAA |
140, 315 |
BstF5I
| GGATGNN| |
733 |
BstNI
| CC|[AT]GG |
1172 |
BstUI
| CG|CG |
875, 880, 960, 1195 |
BstXI
| CCANNNNN|NTGG |
1527 |
BstYI
| Pu|GATCPy |
263, 508, 1419 |
Cac8I
| GCN|NGC |
29, 713 |
DdeI
| C|TNAG |
219, 504, 820, 966, 974, 1312 |
DpnI
| GA-CH3|TC |
215, 262, 401, 507, 904, 977, 1418 |
DpnII
| |GATC |
215, 262, 401, 507, 904, 977, 1418 |
DrdI
| GACNNNN|NNGTC |
184, 1567 |
Fnu4HI
| GC|NGC |
105, 816 |
HaeIII
| GG|CC |
1508 |
HincII
| GTPy|PuAC |
187 |
HindIII
| A|AGCTT |
89, 222, 715, 776, 916 |
HinfI
| G|ANTC |
48, 308, 454, 850, 896, 1125, 1254, 1329, 1352 |
HpaII
| C|CGG |
129 |
Hpy188I
| TCN|GA |
117, 260, 357, 399, 681, 842, 907, 936, 1128, 1389 |
Hpy99I
| CG[AT]CG| |
176, 878 |
HpyCH4III
| ACN|GT |
201, 229, 469, 983, 1432 |
HpyCH4IV
| A|CGT |
177, 195, 685, 1503 |
HpyCH4V
| TG|CA |
30, 106, 1005, 1177, 1299, 1393, 1414 |
MboI
| |GATC |
215, 262, 401, 507, 904, 977, 1418 |
MfeI
| C|AATTG |
322, 535 |
MseI
| T|TAA |
245, 339, 519, 719, 1191 |
MspA1I
| C[AC]G|C[GT]G |
272, 867 |
MspI
| C|CGG |
129 |
MwoI
| GCNNNNN|NNGC |
709, 865, 1097, 1148 |
NlaIII
| CATG| |
28, 1138, 1472 |
NspI
| PuCATG|Py |
29 |
PspGI
| |CC[AT]GG |
1172 |
PvuII
| CAG|CTG |
272 |
RsaI
| GT|AC |
500, 970 |
Sau3AI
| |GATC |
215, 262, 401, 507, 904, 977, 1418 |
ScrFI
| CC|NGG |
1172 |
SexAI
| A|CC[AT]GGT |
1173 |
SfcI
| C|TPuPyAG |
697 |
SmlI
| C|TPyPuAG |
378 |
SphI
| GCATG|C |
29 |
StyI
| C|C[AT][AT]GG |
1512 |
Taqƒ¿I
| T|CGA |
139, 314, 792, 1081, 1163, 1204 |
TfiI
| G|A[AT]TC |
48, 308, 454, 850, 896, 1125, 1254, 1352 |
TseI
| G|C[AT]GC |
105, 816 |
Tsp509I
| |AATT |
321, 406, 464, 534, 573, 1181, 1551 |
XmnI
| GAANN|NNTTC |
896 |
Click here to view TAIR data
>AT1G75410.2 length:1575
ATGGCTGTGT ATTACCCTAA TAGTGTCGGC ATGCAATCTC TTTACCAAGA | 50 |
ATCCATTTAC CTCAACGAAC AACAACAACA ACAACAACAA GCTTCTTCTT | 100 |
CCTCTGCTGC ATCTTTCTCC GAGATTGTTT CCGGTGATGT TCGAAACAAC | 150 |
GAGATGGTAT TTATCCCACC AACAAGCGAC GTAGCCGTCA ACGGAAACGT | 200 |
AACGGTGTCA AGTAACGATC TAAGCTTTCA CGGTGGAGGA CTTTCTTTAA | 250 |
GTCTTGGTAA TCAGATCCAG TCAGCTGTCT CTGTTTCTCC GTTTCAGTAT | 300 |
CATTACCAGA ATCTTTCGAA CCAATTGAGT TACAATAATC TTAATCCTTC | 350 |
TACTATGTCT GATGAGAATG GGAAGAGCTT GAGTGTTCAT CAGCATCACT | 400 |
CTGATCAAAT TTTACCTTCC TCTGTTTACA ACAACAATGG TAATAATGGT | 450 |
GTTGGATTCT ACAACAATTA CCGTTACGAG ACATCAGGGT TTGTGAGTAG | 500 |
TGTACTGAGA TCTCGTTACC TTAAACCAAC ACAACAATTG CTTGATGAAG | 550 |
TTGTTAGTGT AAGGAAAGAT TTGAAATTGG GGAATAAGAA GATGAAGAAT | 600 |
GATAAAGGTC AAGACTTTCA CAATGGGTCT AGTGATAACA TTACAGAAGA | 650 |
TGATAAATCT CAATCGCAGG AGTTGTCTCC TTCAGAACGT CAGGAGCTAC | 700 |
AGAGCAAGAA GAGCAAGCTT TTAACAATGG TGGATGAGGT AGATAAAAGG | 750 |
TATAACCAAT ACCATCATCA AATGGAAGCT TTAGCATCGT CTTTCGAGAT | 800 |
GGTAACAGGT CTTGGAGCAG CTAAGCCTTA CACATCCGTA GCTCTGAATA | 850 |
GAATCTCTCG CCATTTCCGC TGTTTACGCG ACGCGATAAA AGAACAGATT | 900 |
CAGGTGATCA GAGGGAAGCT TGGGGAGAGA GAGACTTCTG ATGAACAAGG | 950 |
AGAGAGGATA CCGCGTCTTA GGTACTTAGA TCAACGGTTG AGACAACAGA | 1000 |
GAGCTTTGCA TCAACAACTT GGAATGGTTA GACCAGCTTG GAGACCACAA | 1050 |
AGAGGCTTAC CTGAAAACTC TGTCTCTATA CTTCGAGCTT GGCTCTTTGA | 1100 |
GCATTTCCTT CATCCATATC CTAAAGAATC AGAGAAAATC ATGCTTTCAA | 1150 |
AGCAGACAGG ACTATCGAAA AACCAGGTTG CAAATTGGTT TATTAACGCG | 1200 |
AGAGTTCGAC TATGGAAACC AATGATTGAA GAGATGTATA AAGAAGAGTT | 1250 |
TGGAGAATCA GCAGAGTTAC TCTCTAACTC TAATCAAGAC ACCAAAAAAA | 1300 |
TGCAGGAAAC ATCTCAGCTC AAACACGAAG ACTCTTCGTC TTCGCAACAA | 1350 |
CAGAATCAGG GAAACAACAA CAACAACATC CCATATACAT CTGATGCAGA | 1400 |
ACAAAACCTA GTCTTTGCAG ATCCTAAACC AGACCGTGCT ACTACTGGAG | 1450 |
ATTACGACAG CTTGATGAAC TATCATGGGT TTGGTATTGA TGATTACAAT | 1500 |
CGTTACGTTG GCCTTGGAAA CCAACAAGAT GGCAGATATT CTAATCCCCA | 1550 |
TCAATTACAC GACTTTGTTG TCTAA | 1600 |
>AT1G75410.2 longest ORF length:524
MAVYYPNSVG MQSLYQESIY LNEQQQQQQQ ASSSSAASFS EIVSGDVRNN | 50 |
EMVFIPPTSD VAVNGNVTVS SNDLSFHGGG LSLSLGNQIQ SAVSVSPFQY | 100 |
HYQNLSNQLS YNNLNPSTMS DENGKSLSVH QHHSDQILPS SVYNNNGNNG | 150 |
VGFYNNYRYE TSGFVSSVLR SRYLKPTQQL LDEVVSVRKD LKLGNKKMKN | 200 |
DKGQDFHNGS SDNITEDDKS QSQELSPSER QELQSKKSKL LTMVDEVDKR | 250 |
YNQYHHQMEA LASSFEMVTG LGAAKPYTSV ALNRISRHFR CLRDAIKEQI | 300 |
QVIRGKLGER ETSDEQGERI PRLRYLDQRL RQQRALHQQL GMVRPAWRPQ | 350 |
RGLPENSVSI LRAWLFEHFL HPYPKESEKI MLSKQTGLSK NQVANWFINA | 400 |
RVRLWKPMIE EMYKEEFGES AELLSNSNQD TKKMQETSQL KHEDSSSSQQ | 450 |
QNQGNNNNNI PYTSDAEQNL VFADPKPDRA TTGDYDSLMN YHGFGIDDYN | 500 |
RYVGLGNQQD GRYSNPHQLH DFVV | 550 |
|