fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G75430 BLH11 BEL1-like homeodomain 11 (.1)

>AT1G75430.1 CDS map

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Uncut enzymes: AatII, Acc65I, AccI, AccII(FnuDII), AccIII(BspMII), AciI, AclI, AfeI, AflII, AflIII, AhdI, AlwI, AlwNI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BclI, BfaI, BglI, BglII, BmrI, BpmI, BsaAI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, Bsp1286I, BspEI, BspMI, BspT107I(HgiCI), BsrBI, BssHII, BssSI, BstAPI, BstEII, BstF5I, BstUI, BstXI, BstYI, BstZ17I, Bsu36I, BtrI, DraI, DraIII, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, Fnu4HI, FokI, FseI, FspI, HaeII, HaeIII, HgaI, HhaI, HinP1I, HincII, HpaI, HphI, HpyCH4III, HpyCH4IV, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, N.BstNBI, NaeI, , NarI, NcoI, NdeI, NgoMIV, NheI, NlaIV, NotI, NruI, NsiI, PI-PspI, PI-SceI(VDE), PacI, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PshAI, PspOMI, PstI, PvuI, RsrII, SacI, SacII, SalI, SapI, SbfI, SexAI, SfaNI, SfcI, SfiI, SfoI, SgrAI, SmaI, SnaBI, SpeI, SphI, SspI, StuI, StyI, SwaI, TseI, Tsp45I, Tth111I, XbaI, XcmI, XmaI, XmnI
Name Recognition sequence Cut positions
AgeI A|CCGGT 388
AluI AG|CT 123, 150, 270, 394, 450, 509, 525, 530, 652, 702
ApoI Pu|AATTPy 814
AvaI C|PyCGPuG 767
AvaII G|G[AT]CC 588
BlpI GC|TNAGC 529
BsaBI GATNN|NNATC 256
BsaHI GPu|CGPyC 714
BsaJI C|CNNGG 39
BsaWI [AT]|CCGG[AT] 388
BslI CCNNNNN|NNGG 618
BsoBI C|PyCGPuG 767
BspDI AT|CGAT 100
BspHI T|CATGA 246
BsrDI GCAATGNN| 80
BsrFI Pu|CCGGPy 388
BsrGI T|GTACA 383
BsrI ACTGGN| 327
BssKI |CCNGG 159, 174
BstBI TT|CGAA 732
BstNI CC|[AT]GG 159
BtgI C|CPuPyGG 39
BtsI GCAGTGNN| 75
Cac8I GCN|NGC 623
Cfr10I [AG]|CCGG[TC] 388
ClaI AT|CGAT 100
DdeI C|TNAG 67, 238, 276, 448, 528, 628, 827
DpnI GA-CH3|TC 369, 502
DpnII |GATC 369, 502
HindIII A|AGCTT 271
HinfI G|ANTC 54, 242, 251, 410, 472, 775, 822, 834, 861
HpaII C|CGG 174, 387
Hpy188I TCN|GA 192, 204, 467, 616, 649, 686
Hpy99I CG[AT]CG| 465
HpyCH4V TG|CA 75, 128, 212, 285, 317, 640, 675, 840
MboI |GATC 369, 502
MslI CAPyNN|NNPuTG 491
MspA1I C[AC]G|C[GT]G 151
MspI C|CGG 174, 387
MwoI GCNNNNN|NNGC 402
NciI CC|[CG]GG 174
NlaIII CATG| 20, 226, 245, 406, 599
NspI PuCATG|Py 600
PaeR7I C|TCGAG 767
PsiI TTA|TAA 758
PspGI |CC[AT]GG 159
PvuII CAG|CTG 151
RsaI GT|AC 42, 313, 382
Sau3AI |GATC 369, 502
Sau96I G|GNCC 588
ScaI AGT|ACT 314
ScrFI CC|NGG 159, 174
SmlI C|TPyPuAG 767
Taqƒ¿I T|CGA 99, 412, 537, 731, 766, 772
TfiI G|A[AT]TC 54, 242, 251, 472, 822, 834, 861
TliI C|TCGAG 767
Tsp509I |AATT 643, 749, 813
TspRI NNCA[CG]TGNN| 75
XhoI C|TCGAG 767


Click here to view TAIR data

>AT1G75430.1 length:873
ATGGAGGATT TTAGGGTAAG ACATGAGTGT TCATCTCTCC GTGGTACTTT 
50
GTTGGATTCA AGATATGCTA AGGCAGTGCA ATGCCTTGTA GAAGAAGTTA 
100
TCGATATAGG TGGTAGAGAG GTTGAGCTTT GCAACAACAT TCTAATCAAT 
150
CAGCTGTTTC CAGGAAGGAG AAGACCCGGT TTTGCTTTGT CTTCCGAAAT 
200
CAAATCCGAA CTTTGCAGTT CTGGTTTCAT GTCTTTGCCT GAGAATCATG 
250
AGATTCATAT CAAAATCACA AAGCTTCTCA GTTTGTTGCA ACAGGTAGAA 
300
GAAAGATTTG AGCAGTACTG CAATCAACTG GAGCAAGTGA TTTCATCATT 
350
TGAGGAAATA GCAGGAGAAG GATCATCTAA AGTGTACACC GGTTTAGCTC 
400
TCCAAGCCAT GACTCGACAT TTCGGTAGTC TTGAAGAAGC AATAATCTCT 
450
CAGCTAAACT CTGTTCGTCG GAGATTCATC ATTTCTCATC AAGATGTTCC 
500
CAAGATCATC AGCTCTGGCT TATCACAGCT CAGCTTGTTC GATGGGAACA 
550
CCACTTCATC ATCACTTCAG CGACTTGGTT TGGTTCAAGG ACCACAGAGA 
600
CATGCTTGGA AACCCATCAG AGGCTTGCCT GAGACTTCCG TTGCAATTCT 
650
CCGAGCTTGG CTCTTTCAAC ATTTCTTGCA CCCTTATCCG AATGAAGCAG 
700
AGAAGCTGGT GTTGGCGTCT CAAACAGGAC TTTCGAAGAA CCAAGTATCA 
750
AATTGGTTTA TAAATGCTCG AGTTCGACTC TGGAAACCGA TGATAGAAGA 
800
GATGTATAGA GAGGAATTTG GAGATTCCTT AGATGAATCA ATGCAAAGAG 
850
AAGCCAATGA TGATTCAAAC TAA
900

>AT1G75430.1 longest ORF length:290
MEDFRVRHEC SSLRGTLLDS RYAKAVQCLV EEVIDIGGRE VELCNNILIN 
50
QLFPGRRRPG FALSSEIKSE LCSSGFMSLP ENHEIHIKIT KLLSLLQQVE 
100
ERFEQYCNQL EQVISSFEEI AGEGSSKVYT GLALQAMTRH FGSLEEAIIS 
150
QLNSVRRRFI ISHQDVPKII SSGLSQLSLF DGNTTSSSLQ RLGLVQGPQR 
200
HAWKPIRGLP ETSVAILRAW LFQHFLHPYP NEAEKLVLAS QTGLSKNQVS 
250
NWFINARVRL WKPMIEEMYR EEFGDSLDES MQREANDDSN 
300