Locus |
Common name |
Short description |
AT1G75490 |
DREB2D |
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G75490.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
441 |
KpnI
| GGTAC|C |
205 |
NcoI
| C|CATGG |
526 |
SacI
| GAGCT|C |
188 |
StyI
| C|C[AT][AT]GG |
233, 526 |
Click here to view TAIR data
>AT1G75490.1 length:621
ATGTCATCCA TAGAGCCAAA AGTAATGATG GTTGGTGCTA ATAAGAAACA | 50 |
ACGAACCGTC CAAGCTAGTT CGAGGAAAGG TTGTATGAGA GGAAAAGGTG | 100 |
GACCCGATAA CGCGTCTTGC ACTTACAAAG GTGTTAGACA ACGCACTTGG | 150 |
GGCAAATGGG TCGCTGAGAT CCGCGAGCCT AACCGAGGAG CTCGTCTTTG | 200 |
GCTCGGTACC TTCGACACCT CCCGTGAAGC TGCCTTGGCT TATGACTCCG | 250 |
CAGCTCGTAA GCTCTATGGG CCTGAGGCTC ATCTCAACCT CCCTGAGTCC | 300 |
TTAAGAAGTT ACCCTAAAAC GGCGTCGTCT CCGGCGTCCC AGACTACACC | 350 |
AAGCAGCAAC ACCGGTGGAA AAAGCAGCAG CGACTCTGAG TCGCCGTGTT | 400 |
CATCCAACGA GATGTCATCA TGTGGAAGAG TGACAGAGGA GATATCATGG | 450 |
GAGCATATAA ACGTGGATTT GCCGGTAATG GATGATTCTT CAATATGGGA | 500 |
AGAAGCTACA ATGTCGTTAG GATTTCCATG GGTTCATGAA GGAGATAATG | 550 |
ATATTTCTCG GTTTGATACT TGTATTTCCG GTGGCTATTC TAATTGGGAT | 600 |
TCCTTTCATT CCCCACTTTG A | 650 |
>AT1G75490.1 longest ORF length:206
MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW | 50 |
GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES | 100 |
LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW | 150 |
EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD | 200 |
SFHSPL | 250 |
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