fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G75490 DREB2D Integrase-type DNA-binding superfamily protein (.1)

>AT1G75490.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 441
KpnI GGTAC|C 205
NcoI C|CATGG 526
SacI GAGCT|C 188
StyI C|C[AT][AT]GG 233, 526


Click here to view TAIR data

>AT1G75490.1 length:621
ATGTCATCCA TAGAGCCAAA AGTAATGATG GTTGGTGCTA ATAAGAAACA 
50
ACGAACCGTC CAAGCTAGTT CGAGGAAAGG TTGTATGAGA GGAAAAGGTG 
100
GACCCGATAA CGCGTCTTGC ACTTACAAAG GTGTTAGACA ACGCACTTGG 
150
GGCAAATGGG TCGCTGAGAT CCGCGAGCCT AACCGAGGAG CTCGTCTTTG 
200
GCTCGGTACC TTCGACACCT CCCGTGAAGC TGCCTTGGCT TATGACTCCG 
250
CAGCTCGTAA GCTCTATGGG CCTGAGGCTC ATCTCAACCT CCCTGAGTCC 
300
TTAAGAAGTT ACCCTAAAAC GGCGTCGTCT CCGGCGTCCC AGACTACACC 
350
AAGCAGCAAC ACCGGTGGAA AAAGCAGCAG CGACTCTGAG TCGCCGTGTT 
400
CATCCAACGA GATGTCATCA TGTGGAAGAG TGACAGAGGA GATATCATGG 
450
GAGCATATAA ACGTGGATTT GCCGGTAATG GATGATTCTT CAATATGGGA 
500
AGAAGCTACA ATGTCGTTAG GATTTCCATG GGTTCATGAA GGAGATAATG 
550
ATATTTCTCG GTTTGATACT TGTATTTCCG GTGGCTATTC TAATTGGGAT 
600
TCCTTTCATT CCCCACTTTG A
650

>AT1G75490.1 longest ORF length:206
MSSIEPKVMM VGANKKQRTV QASSRKGCMR GKGGPDNASC TYKGVRQRTW 
50
GKWVAEIREP NRGARLWLGT FDTSREAALA YDSAARKLYG PEAHLNLPES 
100
LRSYPKTASS PASQTTPSSN TGGKSSSDSE SPCSSNEMSS CGRVTEEISW 
150
EHINVDLPVM DDSSIWEEAT MSLGFPWVHE GDNDISRFDT CISGGYSNWD 
200
SFHSPL
250