fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G75530 Forkhead-associated (FHA) domain-containing protein (.1)

>AT1G75530.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, HindIII, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI
Name Recognition sequence Cut positions
BglII A|GATCT 1164
EcoRI G|AATTC 1655
EcoRV GAT|ATC 796, 1414
HpaI GTT|AAC 736
SacI GAGCT|C 193, 206
StyI C|C[AT][AT]GG 158
XbaI T|CTAGA 66, 1167
XhoI C|TCGAG 49


Click here to view TAIR data

>AT1G75530.1 length:1668
ATGGCGTTTC AGTGGTTACC TGAAGATGAT TATCTTCTCA GAAAATCACT 
50
CGAGGATGGA ACTTCTCTAG AGACGTTAGC TAAAGGAGCG GTGAGATTCT 
100
CTCGAAAATT TACACTTTCA GAACTAACAG AGCGATGGCA TTGTCTTCTT 
150
TACAATCCCA AGGTTACATC TCTGTCTTCA TCAGTCGGAT TTGAGCTCCA 
200
ATACGGAGCT CAATTCGTTC CACAAAGTCT CTTTGATTCA GTACCAGTCA 
250
GAACTCATTA CTACACTACA CGAAAAAGGC GGCGTTTGGA GTTAGAGGAG 
300
TCTCTTAAGG TCAATAACAA TGCCATTGAT GAACATCTTA ATGTGGAGGA 
350
AGGGAATTTG TTTGGAGAAT GTGATGATGA TTTTGGTTTC AAGTTTGAGG 
400
ACATTGAAAG TTTTCGCAAC ACTTTCCCAG ACATTTTGCT TTCCCCTCAT 
450
GATTATCAGA CAACTATCTT TGGTAATGAG ATTGATGATG AGGATGATCG 
500
AATGGTGAAT CAGATGTTAA ACATCAACGA TGACCAGATT CATGACTCTT 
550
ATGTTACAGA CACAATAACA ACAACAACAG AACATGTTCT GCTTCAAGAA 
600
GTGTTTCAAG ATCCTCTGTT TCAACAACCT AACGCATCCT TGAATGAGCC 
650
AGCATCACCG TCACAGCAGC AAGTAATCCT TGATCAAGCA GAGATTTGGA 
700
TTCCTCCACC GCCTTATGAT CCACATCCAG AAATCGTTAA CGGTGTTATC 
750
AATTGTGTTA TAAACCGTGA GTCCGATGAG ATTCCAGATA ATGATGATAT 
800
CAACCTGCAA CTGTACAATC CTAAAGCTCG AAACTCGGTT AATCCTTCAT 
850
CAGTGAGGAA TAATATGAAG CCACCTCTGC CTCCAGTTAG AAGATCATCC 
900
TTACAAGTCA AGAGCAAAGA CATTATCGAC AGTTCTGGTT TTGGAGATTG 
950
TGCTGTCACA ACCCGAGCAA GTTCTTCTTC TGCATTCAGT GATAGCTTTA 
1000
CTGAGAAAGC GACATCTACT GTTGCTGCAA CAACTTCATC AACTCTACAA 
1050
CACTTTCCAG AGAATGAAAT TTGTGAACAG ACATTGAGTG CAGAGATGGA 
1100
TATAAACGTA CCAGAGGAGA ATAATATTGA AATTGAGAGT GATGAAGAGT 
1150
TGCCTTCCTT TTCAGATCTA GAAGCTATGA TTCTTGACAT GGACCTTGAA 
1200
CCGATTGGTC AAGACCAGTA CGAGTTGGAC GCTTCAAAAT ATCGAAACGA 
1250
GGAAATGGCG CGAAAGATAA TGAGATTAGA GCAGAGTGCT GAATCTTACA 
1300
TGAACCGTGA CATCGCTGCT CATGGAGCTT TCGCTCTTCT ATATGGAAGC 
1350
TCTAAGCATT ACATCAATAA ACCAGAGGTG TTACTTGGAA GAGCAACAGG 
1400
TGAATATCCG GTGGATATCG ACTTAGGAAG GTCAGGGTCT GAAACAAGAT 
1450
TCTCTCGACG ACAGGCTCTA ATAAAGTTGA AGCAAGATGG GAGTTTTGAA 
1500
ATCAAGAATC TTGGGAAGTT TTCGATATGG ATGAACGATG AGGAAATTAA 
1550
TCATGGAGAA GTTGTCATTC TCAAGAACAA TTGCTTAATC CAGATACGAG 
1600
AAAAGTCGTT CATATTCGAG AAGAATGAGA AAGCAGTCAA AAGATATTTA 
1650
GATGGAATTC ACAAATGA
1700

>AT1G75530.1 longest ORF length:555
MAFQWLPEDD YLLRKSLEDG TSLETLAKGA VRFSRKFTLS ELTERWHCLL 
50
YNPKVTSLSS SVGFELQYGA QFVPQSLFDS VPVRTHYYTT RKRRRLELEE 
100
SLKVNNNAID EHLNVEEGNL FGECDDDFGF KFEDIESFRN TFPDILLSPH 
150
DYQTTIFGNE IDDEDDRMVN QMLNINDDQI HDSYVTDTIT TTTEHVLLQE 
200
VFQDPLFQQP NASLNEPASP SQQQVILDQA EIWIPPPPYD PHPEIVNGVI 
250
NCVINRESDE IPDNDDINLQ LYNPKARNSV NPSSVRNNMK PPLPPVRRSS 
300
LQVKSKDIID SSGFGDCAVT TRASSSSAFS DSFTEKATST VAATTSSTLQ 
350
HFPENEICEQ TLSAEMDINV PEENNIEIES DEELPSFSDL EAMILDMDLE 
400
PIGQDQYELD ASKYRNEEMA RKIMRLEQSA ESYMNRDIAA HGAFALLYGS 
450
SKHYINKPEV LLGRATGEYP VDIDLGRSGS ETRFSRRQAL IKLKQDGSFE 
500
IKNLGKFSIW MNDEEINHGE VVILKNNCLI QIREKSFIFE KNEKAVKRYL 
550
DGIHK
600