Locus |
Common name |
Short description |
AT1G75540 |
LHUS, AtBBX21, STH2 |
long hypocotyl under shade, B-box domain protein 21, B BOX 21, salt tolerance homolog2 (.1) |
>AT1G75540.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
517 |
BglII
| A|GATCT |
982 |
Click here to view TAIR data
>AT1G75540.1 length:996
ATGAAGATCA GGTGCGACGT CTGCGATAAA GAAGAAGCGT CGGTGTTTTG | 50 |
CACGGCCGAC GAAGCATCTC TCTGCGGCGG CTGCGACCAC CAAGTCCACC | 100 |
ACGCTAACAA ACTCGCCTCT AAACATCTCC GTTTCTCTCT CCTTTATCCT | 150 |
TCTTCTTCCA ACACCTCCTC TCCTCTCTGC GACATCTGTC AGGATAAAAA | 200 |
AGCTCTGTTG TTCTGTCAAC AAGATAGAGC TATTTTATGC AAAGATTGCG | 250 |
ATTCATCGAT CCACGCTGCG AACGAACACA CAAAGAAACA CGATAGGTTT | 300 |
CTTCTTACAG GGGTTAAGCT CTCTGCAACA TCGTCTGTTT ACAAACCTAC | 350 |
TTCGAAATCT TCTTCTTCTT CTTCAAGCAA CCAAGATTTC TCTGTCCCTG | 400 |
GATCATCAAT CTCTAATCCT CCTCCTCTCA AGAAACCTCT CTCAGCTCCT | 450 |
CCTCAGAGCA ACAAGATCCA ACCCTTTTCG AAGATCAACG GCGGTGATGC | 500 |
GTCGGTGAAT CAGTGGGGAT CCACAAGCAC GATTTCTGAG TATTTGATGG | 550 |
ATACGTTACC TGGTTGGCAC GTTGAGGATT TCCTCGATTC CTCTCTTCCT | 600 |
ACTTATGGTT TCTCTAAGAG TGGTGATGAT GATGGAGTGT TACCATATAT | 650 |
GGAACCAGAA GATGACAACA ACACTAAGAG AAACAACAAC AACAACAACA | 700 |
ACAACAACAA CAATACAGTG TCACTTCCAT CTAAGAATTT AGGGATTTGG | 750 |
GTCCCTCAGA TTCCACAAAC TCTTCCTTCT TCATACCCAA ATCAATACTT | 800 |
TTCTCAAGAC AACAACATAC AGTTTGGGAT GTACAACAAA GAAACATCAC | 850 |
CAGAAGTAGT GTCTTTTGCT CCAATACAAA ACATGAAACA ACAAGGACAG | 900 |
AACAACAAGA GATGGTATGA TGATGGTGGC TTCACTGTCC CACAGATCAC | 950 |
TCCTCCTCCT CTTTCTTCTA ATAAAAAGTT TAGATCTTTC TGGTAA | 1000 |
>AT1G75540.1 longest ORF length:331
MKIRCDVCDK EEASVFCTAD EASLCGGCDH QVHHANKLAS KHLRFSLLYP | 50 |
SSSNTSSPLC DICQDKKALL FCQQDRAILC KDCDSSIHAA NEHTKKHDRF | 100 |
LLTGVKLSAT SSVYKPTSKS SSSSSSNQDF SVPGSSISNP PPLKKPLSAP | 150 |
PQSNKIQPFS KINGGDASVN QWGSTSTISE YLMDTLPGWH VEDFLDSSLP | 200 |
TYGFSKSGDD DGVLPYMEPE DDNNTKRNNN NNNNNNNNTV SLPSKNLGIW | 250 |
VPQIPQTLPS SYPNQYFSQD NNIQFGMYNK ETSPEVVSFA PIQNMKQQGQ | 300 |
NNKRWYDDGG FTVPQITPPP LSSNKKFRSF W | 350 |
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