fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G76110 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain (.1)

>AT1G76110.1 CDS map

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Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name Recognition sequence Cut positions
EcoRV GAT|ATC 491


Click here to view TAIR data

>AT1G76110.1 length:1017
ATGTCATCGG ACAACGAATC GACACCGTCT CAAGCGACGG TAGAAATGAT 
50
GGCGACTTCG CCGGCGAAGA TTAAAGAGTA TCCAGAACCA TTGGCTTTAC 
100
ATGAAGTTGT CGTCAAGGAT TCTTCTGTCT TCTGGGATAC TCTCAGGCGG 
150
TTTCACTCAA TTATGTCCAC TAAGTTCATG ATTCCTGTGA TTGGAGGAAA 
200
AGAACTAGAT TTGCATGTTT TGTATGTGGA AGTCACGAGG AGGGGAGGTT 
250
ACGAAAAGGT AGTCGTAGAG AAAAAATGGA GGGAAGTTGG AGGAGTGTTT 
300
AGATTCTCTG CGACAACAAC AAGTGCTTCG TTTGTCTTAA GGAAACATTA 
350
TCTCAATCTT CTCTTCCATT ACGAACAAGT TCATCTCTTC ACTGCTCGTG 
400
GTCCTCTTCT TCATCCCATA GCTACATTTC ATGCAAATCC CTCAACGAGC 
450
AAAGAAATGG CGCTCGTCGA ATATACTCCT CCGAGTATAA GATATCATAA 
500
TACTCATCCT CCTTCTCAAG GTTCGTCGAG TTTCACAGCC ATAGGTACAA 
550
TAGAAGGCAA ATTCGATTGT GGTTATCTGG TAAAAGTTAA GTTGGGCTCA 
600
GAGATTCTTA ACGGCGTTCT TTATCATTCG GCCCAGCCCG GCCCATCATC 
650
ATCTCCAACC GCTGTTCTAA ACAATGCCGT TGTACCTTAT GTTGAAACTG 
700
GGAGGAGACG GCGTCGTTTA GGTAAAAGAC GAAGAAGCAG ACGCAGAGAA 
750
GATCCGAATT ACCCGAAACC GAACCGGAGC GGTTACAATT TCTTCTTTGC 
800
TGAGAAACAT TGCAAGCTCA AATCACTTTA TCCCAACAAG GAGAGAGAGT 
850
TTACGAAACT TATCGGAGAA TCGTGGAGCA ATCTCTCTAC CGAAGAACGA 
900
ATGGTTTATC AAGACATTGG ATTGAAGGAT AAGGAAAGGT ATCAGAGGGA 
950
GTTGAATGAG TACAGAGAAA CGTTGAGACT TAGGGATGGT GACATGACAA 
1000
ACGGCAAGGC TTTTTAG
1050

>AT1G76110.1 longest ORF length:338
MSSDNESTPS QATVEMMATS PAKIKEYPEP LALHEVVVKD SSVFWDTLRR 
50
FHSIMSTKFM IPVIGGKELD LHVLYVEVTR RGGYEKVVVE KKWREVGGVF 
100
RFSATTTSAS FVLRKHYLNL LFHYEQVHLF TARGPLLHPI ATFHANPSTS 
150
KEMALVEYTP PSIRYHNTHP PSQGSSSFTA IGTIEGKFDC GYLVKVKLGS 
200
EILNGVLYHS AQPGPSSSPT AVLNNAVVPY VETGRRRRRL GKRRRSRRRE 
250
DPNYPKPNRS GYNFFFAEKH CKLKSLYPNK EREFTKLIGE SWSNLSTEER 
300
MVYQDIGLKD KERYQRELNE YRETLRLRDG DMTNGKAF
350