fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G76320 FRS4 FAR1-related sequence 4 (.1.2)

>AT1G76320.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BglII, HpaI, KpnI, NdeI, NheI, NotI, PstI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 1885
EcoRI G|AATTC 109, 1009, 1167
EcoRV GAT|ATC 1535
HindIII A|AGCTT 1778
NcoI C|CATGG 1939
PacI TTAAT|TAA 2130
SpeI A|CTAGT 681
StyI C|C[AT][AT]GG 922, 1939


Click here to view TAIR data

>AT1G76320.2 length:2193
ATGGAGTTCG AGACTCACGA AGATGCGTAT TTGTTCTACA AAGACTACGC 
50
CAAGTCCGTT GGTTTCGGAA CTGCGAAATT AAGCAGCCGA AGATCAAGAG 
100
CTTCAAAGGA ATTCATCGAT GCCAAATTCT CCTGCATACG CTACGGAAGC 
150
AAACAACAAT CCGATGACGC GATAAACCCT AGAGCTTCTC CTAAGATCGG 
200
ATGCAAAGCA AGTATGCATG TAAAACGAAG ACCAGATGGG AAATGGTACG 
250
TTTACAGTTT CGTCAAGGAG CATAATCACG ATCTTTTACC AGAGCAAGCT 
300
CATTATTTCC GGAGCCATAG AAACACAGAG CTTGTGAAAT CCAACGATTC 
350
TCGTCTCAGG AGGAAGAAGA ACACTCCGTT GACTGATTGT AAACATCTCA 
400
GTGCTTATCA TGATCTTGAT TTTATAGATG GTTATATGAG GAATCAACAT 
450
GATAAAGGAC GGAGACTTGT TCTTGATACT GGTGATGCAG AGATTTTGCT 
500
TGAGTTTCTT ATGCGTATGC AAGAAGAGAA TCCCAAGTTT TTTTTCGCTG 
550
TTGATTTCAG TGAAGATCAT CTTCTGAGGA ATGTGTTCTG GGTTGATGCT 
600
AAAGGGATTG AAGATTACAA AAGTTTCAGT GATGTGGTTT CTTTTGAGAC 
650
GTCTTATTTC GTGAGTAAGT ATAAAGTACC ACTAGTTCTT TTTGTTGGAG 
700
TTAATCATCA TGTACAACCT GTGTTGCTTG GGTGTGGATT GCTTGCAGAT 
750
GATACTGTTT ACACTTATGT TTGGTTGATG CAATCTTGGT TAGTGGCTAT 
800
GGGTGGTCAA AAACCTAAAG TTATGCTTAC TGACCAAAAC AATGCTATTA 
850
AAGCTGCAAT CGCTGCGGTT TTACCGGAAA CTCGCCATTG TTATTGCTTG 
900
TGGCATGTGT TGGACCAGCT TCCTAGGAAT CTGGACTATT GGAGTATGTG 
950
GCAAGACACT TTTATGAAGA AGTTGTTCAA ATGTATATAC AGGTCATGGT 
1000
CTGAGGAGGA ATTCGATAGG AGGTGGTTGA AGCTGATAGA CAAGTTTCAT 
1050
CTTAGAGATG TTCCGTGGAT GCGGTCTTTG TATGAGGAAC GTAAGTTCTG 
1100
GGCACCTACT TTTATGAGGG GAATAACATT TGCGGGGTTA TCTATGCGTT 
1150
GTCGTTCAGA AAGTGTGAAT TCTTTGTTTG ATAGGTATGT TCACCCTGAA 
1200
ACCTCACTTA AGGAGTTCTT AGAAGGATAT GGGCTAATGC TAGAAGATAG 
1250
GTATGAAGAG GAAGCTAAAG CAGATTTTGA TGCTTGGCAT GAAGCACCTG 
1300
AGTTGAAATC TCCATCACCT TTTGAGAAGC AGATGTTACT TGTATACTCC 
1350
CATGAAATAT TCAGGAGATT CCAACTTGAG GTTCTGGGTG CTGCTGCTTG 
1400
TCACCTTACG AAGGAGAGTG AGGAAGGAAC AACTTACAGT GTTAAGGACT 
1450
TTGACGACGA ACAGAAGTAT TTGGTGGATT GGGATGAATT TAAGTCAGAT 
1500
ATTTACTGCT CTTGCCGTTC CTTTGAGTAC AAGGGATATC TCTGTAGACA 
1550
CGCAATTGTT GTCCTCCAAA TGTCGGGTGT TTTCACCATT CCGATAAACT 
1600
ATGTGTTGCA AAGATGGACA AATGCAGCTA GAAACAGACA TCAGATCAGC 
1650
AGAAACCTTG AACTTGTGCA GTCTAATATC CGCCGTTTCA ATGATCTATG 
1700
CCGCCGAGCC ATTATATTGG GAGAAGAAGG ATCTCTATCC CAAGAAAGTT 
1750
ATGACATCGC CATGTTTGCA ATGAAAGAAG CTTTTAAGCA ATGTGCTGTT 
1800
ACGATTAATA CCATCAAACA TCCCGCCAGG TGTGAAGAAG CTGCAATTCA 
1850
AGCAGGAGAT CCTGTCCAGG AAGAAAATCA ATATGGATCC ACATCGACAC 
1900
AGATTGGACC CGAACCTAAC ATACATGCAG GCAATGTTCC ATGGCAAGCT 
1950
GAAACCAGAA GGGAGAAGAG AAGTAGCCTA AACAATACAT CTAAAAAGCA 
2000
TGTGGCTCAA TCTGAAACTG TTGGTGAGGG AAGCCAAGAA GGATTTCAAC 
2050
ATGTGGCTGA TCCAAGACAG TCACAGGCGG TATTGGCAGG GCAATTTCAC 
2100
AACACAATGC CAGGAGTATT CCAAAACTTA ATTAACACGA ACTTCCAAAA 
2150
CATTCCGGCT ACAAATATGC ACCAGAACAA TCCCCCTGGG TGA
2200

>AT1G76320.2 longest ORF length:730
MEFETHEDAY LFYKDYAKSV GFGTAKLSSR RSRASKEFID AKFSCIRYGS 
50
KQQSDDAINP RASPKIGCKA SMHVKRRPDG KWYVYSFVKE HNHDLLPEQA 
100
HYFRSHRNTE LVKSNDSRLR RKKNTPLTDC KHLSAYHDLD FIDGYMRNQH 
150
DKGRRLVLDT GDAEILLEFL MRMQEENPKF FFAVDFSEDH LLRNVFWVDA 
200
KGIEDYKSFS DVVSFETSYF VSKYKVPLVL FVGVNHHVQP VLLGCGLLAD 
250
DTVYTYVWLM QSWLVAMGGQ KPKVMLTDQN NAIKAAIAAV LPETRHCYCL 
300
WHVLDQLPRN LDYWSMWQDT FMKKLFKCIY RSWSEEEFDR RWLKLIDKFH 
350
LRDVPWMRSL YEERKFWAPT FMRGITFAGL SMRCRSESVN SLFDRYVHPE 
400
TSLKEFLEGY GLMLEDRYEE EAKADFDAWH EAPELKSPSP FEKQMLLVYS 
450
HEIFRRFQLE VLGAAACHLT KESEEGTTYS VKDFDDEQKY LVDWDEFKSD 
500
IYCSCRSFEY KGYLCRHAIV VLQMSGVFTI PINYVLQRWT NAARNRHQIS 
550
RNLELVQSNI RRFNDLCRRA IILGEEGSLS QESYDIAMFA MKEAFKQCAV 
600
TINTIKHPAR CEEAAIQAGD PVQEENQYGS TSTQIGPEPN IHAGNVPWQA 
650
ETRREKRSSL NNTSKKHVAQ SETVGEGSQE GFQHVADPRQ SQAVLAGQFH 
700
NTMPGVFQNL INTNFQNIPA TNMHQNNPPG 
750