Locus |
Common name |
Short description |
AT1G76420 |
NAC368, CUC3, ANAC031 |
CUP SHAPED COTYLEDON3, Arabidopsis NAC domain containing protein 31, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1) |
>AT1G76420.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
135 |
PvuII
| CAG|CTG |
997 |
SacI
| GAGCT|C |
100, 736 |
StyI
| C|C[AT][AT]GG |
135, 190 |
Click here to view TAIR data
>AT1G76420.1 length:1005
ATGATGCTTG CGGTGGAAGA TGTGTTAAGC GAACTCGCCG GAGAAGAAAG | 50 |
GAACGAGAGA GGATTGCCAC CTGGCTTCCG GTTTCACCCG ACGGACGAAG | 100 |
AGCTCATTAC CTTCTACTTA GCTTCCAAAA TCTTCCATGG TGGTCTCTCC | 150 |
GGCATTCACA TTTCCGAAGT TGATCTCAAC CGCTGTGAAC CTTGGGAGCT | 200 |
ACCAGAAATG GCGAAGATGG GAGAGAGAGA GTGGTACTTT TATAGTCTAA | 250 |
GGGACAGGAA ATATCCGACA GGTTTGAGGA CTAACAGAGC AACTACTGCT | 300 |
GGATACTGGA AAGCTACCGG CAAAGATAAG GAAGTCTTCT CCGGCGGAGG | 350 |
AGGACAGCTT GTTGGGATGA AGAAGACGTT GGTGTTCTAC AAAGGTAGGG | 400 |
CTCCACGTGG CCTCAAGACT AAGTGGGTCA TGCATGAGTA TCGCCTCGAA | 450 |
AACGACCATT CACACCGCCA CACGTGTAAG GAGGAATGGG TGATTTGCAG | 500 |
AGTGTTCAAT AAAACAGGAG ACAGAAAAAA TGTTGGATTA ATCCATAACC | 550 |
AAATCAGCTA CCTTCATAAC CATTCACTCT CAACAACACA TCATCATCAT | 600 |
CATGAAGCCT TACCTTTGCT TATAGAACCT TCCAACAAAA CCCTAACCAA | 650 |
CTTCCCATCA CTACTCTACG ATGATCCACA CCAAAACTAC AATAATAACA | 700 |
ACTTCCTTCA TGGATCATCA GGCCACAACA TCGACGAGCT CAAAGCCTTA | 750 |
ATCAACCCTG TCGTCTCTCA GCTCAACGGT ATCATCTTTC CTTCAGGGAA | 800 |
CAACAACAAC GACGAAGACG ACTTCGACTT TAACCTCGGC GTGAAAACAG | 850 |
AGCAGTCTTC GAACGGTAAC GAAATTGACG TACGAGATTA CTTGGAGAAC | 900 |
CCTCTGTTTC AGGAAGCGAG TTATGGTCTG TTGGGTTTTT CGTCTTCTCC | 950 |
TGGACCTCTT CACATGCTAC TAGATTCTCC ATGTCCTTTA GGATTCCAGC | 1000 |
TGTAG | 1050 |
>AT1G76420.1 longest ORF length:334
MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS | 50 |
GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA | 100 |
GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE | 150 |
NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH | 200 |
HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL | 250 |
INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN | 300 |
PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL | 350 |
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