fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G76420 NAC368, CUC3, ANAC031 CUP SHAPED COTYLEDON3, Arabidopsis NAC domain containing protein 31, NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1)

>AT1G76420.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
NcoI C|CATGG 135
PvuII CAG|CTG 997
SacI GAGCT|C 100, 736
StyI C|C[AT][AT]GG 135, 190


Click here to view TAIR data

>AT1G76420.1 length:1005
ATGATGCTTG CGGTGGAAGA TGTGTTAAGC GAACTCGCCG GAGAAGAAAG 
50
GAACGAGAGA GGATTGCCAC CTGGCTTCCG GTTTCACCCG ACGGACGAAG 
100
AGCTCATTAC CTTCTACTTA GCTTCCAAAA TCTTCCATGG TGGTCTCTCC 
150
GGCATTCACA TTTCCGAAGT TGATCTCAAC CGCTGTGAAC CTTGGGAGCT 
200
ACCAGAAATG GCGAAGATGG GAGAGAGAGA GTGGTACTTT TATAGTCTAA 
250
GGGACAGGAA ATATCCGACA GGTTTGAGGA CTAACAGAGC AACTACTGCT 
300
GGATACTGGA AAGCTACCGG CAAAGATAAG GAAGTCTTCT CCGGCGGAGG 
350
AGGACAGCTT GTTGGGATGA AGAAGACGTT GGTGTTCTAC AAAGGTAGGG 
400
CTCCACGTGG CCTCAAGACT AAGTGGGTCA TGCATGAGTA TCGCCTCGAA 
450
AACGACCATT CACACCGCCA CACGTGTAAG GAGGAATGGG TGATTTGCAG 
500
AGTGTTCAAT AAAACAGGAG ACAGAAAAAA TGTTGGATTA ATCCATAACC 
550
AAATCAGCTA CCTTCATAAC CATTCACTCT CAACAACACA TCATCATCAT 
600
CATGAAGCCT TACCTTTGCT TATAGAACCT TCCAACAAAA CCCTAACCAA 
650
CTTCCCATCA CTACTCTACG ATGATCCACA CCAAAACTAC AATAATAACA 
700
ACTTCCTTCA TGGATCATCA GGCCACAACA TCGACGAGCT CAAAGCCTTA 
750
ATCAACCCTG TCGTCTCTCA GCTCAACGGT ATCATCTTTC CTTCAGGGAA 
800
CAACAACAAC GACGAAGACG ACTTCGACTT TAACCTCGGC GTGAAAACAG 
850
AGCAGTCTTC GAACGGTAAC GAAATTGACG TACGAGATTA CTTGGAGAAC 
900
CCTCTGTTTC AGGAAGCGAG TTATGGTCTG TTGGGTTTTT CGTCTTCTCC 
950
TGGACCTCTT CACATGCTAC TAGATTCTCC ATGTCCTTTA GGATTCCAGC 
1000
TGTAG
1050

>AT1G76420.1 longest ORF length:334
MMLAVEDVLS ELAGEERNER GLPPGFRFHP TDEELITFYL ASKIFHGGLS 
50
GIHISEVDLN RCEPWELPEM AKMGEREWYF YSLRDRKYPT GLRTNRATTA 
100
GYWKATGKDK EVFSGGGGQL VGMKKTLVFY KGRAPRGLKT KWVMHEYRLE 
150
NDHSHRHTCK EEWVICRVFN KTGDRKNVGL IHNQISYLHN HSLSTTHHHH 
200
HEALPLLIEP SNKTLTNFPS LLYDDPHQNY NNNNFLHGSS GHNIDELKAL 
250
INPVVSQLNG IIFPSGNNNN DEDDFDFNLG VKTEQSSNGN EIDVRDYLEN 
300
PLFQEASYGL LGFSSSPGPL HMLLDSPCPL GFQL
350