fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G76500 SOB3, AHL29 SUPPRESSOR OF PHYB-4#3, AT-hook motif nuclear-localized protein 29, Predicted AT-hook DNA-binding family protein (.1)

>AT1G76500.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI, XhoI
Name Recognition sequence Cut positions
BamHI G|GATCC 174, 238, 547
BglII A|GATCT 298
EcoRI G|AATTC 144
XbaI T|CTAGA 34


Click here to view TAIR data

>AT1G76500.1 length:909
ATGGACGGTG GTTACGATCA ATCCGGAGGA GCTTCTAGAT ACTTTCACAA 
50
CCTCTTCAGG CCTGAGCTTC ATCACCAGCT TCAACCTCAG CCTCAACTTC 
100
ACCCTTTGCC TCAGCCTCAG CCTCAACCTC AGCCTCAGCA GCAGAATTCA 
150
GATGATGAAT CTGACTCCAA CAAGGATCCG GGTTCCGACC CAGTTACCTC 
200
TGGTTCAACC GGGAAACGTC CACGTGGACG TCCTCCGGGA TCCAAGAACA 
250
AGCCGAAGCC ACCGGTGATA GTGACTAGAG ATAGCCCCAA CGTGCTTAGA 
300
TCTCATGTTC TTGAAGTCTC ATCTGGAGCC GACATAGTCG AGAGCGTTAC 
350
CACTTACGCT CGCAGGAGAG GAAGAGGAGT CTCCATTCTC AGTGGTAACG 
400
GCACGGTGGC TAACGTCAGT CTCCGGCAGC CGGCAACGAC AGCGGCTCAT 
450
GGGGCAAATG GTGGAACCGG AGGTGTTGTG GCTCTACATG GAAGGTTTGA 
500
GATACTTTCC CTCACAGGTA CGGTGTTGCC GCCCCCTGCG CCGCCAGGAT 
550
CCGGTGGTCT TTCTATCTTT CTTTCCGGCG TTCAAGGTCA GGTGATTGGA 
600
GGAAACGTGG TGGCTCCGCT TGTGGCTTCG GGTCCAGTGA TACTAATGGC 
650
TGCATCGTTC TCTAATGCAA CTTTCGAAAG GCTTCCCCTT GAAGATGAAG 
700
GAGGAGAAGG TGGAGAGGGA GGAGAAGTTG GAGAGGGAGG AGGAGGAGAA 
750
GGTGGTCCAC CGCCGGCCAC GTCATCATCA CCACCATCTG GAGCCGGTCA 
800
AGGACAGTTA AGAGGTAACA TGAGTGGTTA TGATCAGTTT GCCGGTGATC 
850
CTCATTTGCT TGGTTGGGGA GCCGCAGCCG CAGCCGCACC ACCAAGACCA 
900
GCCTTTTAG
950

>AT1G76500.1 longest ORF length:302
MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS 
50
DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR 
100
SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH 
150
GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG 
200
GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE 
250
GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP 
300
AF
350