fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G76900 AtTLP1 tubby like protein 1 (.1.2)

>AT1G76900.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, HindIII, HpaI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SalI, SmaI, SpeI, StyI, XbaI
Name Recognition sequence Cut positions
EcoRI G|AATTC 1026
EcoRV GAT|ATC 853
KpnI GGTAC|C 763
SacI GAGCT|C 319
XhoI C|TCGAG 647


Click here to view TAIR data

>AT1G76900.2 length:1368
ATGTCGTTCC GTAGCATAGT TCGTGATGTG AGAGATAGTA TAGGAAGTCT 
50
ATCGAGGCGT AGTTTCGACT TTAAGTTAAG CAGCTTGAAC AAAGAAGGTG 
100
GTAAATCCCG TGGTTCGGTT CAAGATTCTC ATGAGGAACA ACTTGTAGTA 
150
ACGATTCAAG AAACACCGTG GGCGAATCTA CCTCCAGAGT TATTACGTGA 
200
TGTGATCAAA AGACTTGAAG AGAGTGAAAG TGTGTGGCCT GCTCGTAGAC 
250
ATGTTGTTGC TTGTGCTTCT GTTTGCAGGT CATGGAGAGA TATGTGTAAA 
300
GAGATTGTTC AAAGTCCGGA GCTCTCAGGC AAAATCACAT TTCCTGTTTC 
350
GTTGAAACAG CCTGGACCAA GAGATGCAAC AATGCAATGC TTTATCAAAA 
400
GGGATAAATC TAACTTGACT TATCATTTAT ATCTTTGTCT CAGTCCTGCT 
450
TTGTTGGTTG AGAATGGAAA GTTTCTTCTT TCTGCAAAAC GCATAAGAAG 
500
AACTACATAC ACCGAGTACG TGATCTCTAT GCACGCCGAC ACCATTTCGA 
550
GATCAAGCAA TACCTACATT GGCAAAATCA GGTCTAATTT TCTGGGGACG 
600
AAGTTTATAA TATACGATAC ACAACCAGCA TACAACAGCA ACATCGCTCG 
650
AGCGGTCCAA CCGGTAGGTC TTAGCCGCAG ATTCTACTCA AAGAGAGTCT 
700
CTCCCAAAGT ACCTAGTGGG AGCTACAAAA TTGCGCAGGT TTCTTATGAG 
750
CTAAACGTTC TTGGTACCCG TGGTCCGAGG AGAATGCATT GTGCGATGAA 
800
CTCAATTCCC GCCTCTTCCC TTGCGGAAGG CGGAACTGTG CCTGGACAGC 
850
CCGATATCAT TGTCCCGCGC TCTATTCTCG ACGAATCGTT CCGCAGCATT 
900
ACCTCTTCGT CATCGAGAAA AATCACTTAC GATTACTCGA ATGATTTTAG 
950
CAGTGCACGG TTTTCCGACA TTCTTGGCCC GTTAAGCGAA GACCAAGAAG 
1000
TGGTATTAGA AGAAGGGAAA GAGCGGAATT CGCCACCACT TGTGCTTAAG 
1050
AACAAGCCGC CGAGGTGGCA TGAACAGCTT CAGTGTTGGT GTTTAAACTT 
1100
CAGGGGACGT GTAACAGTCG CATCAGTTAA GAACTTTCAG CTCATTGCAG 
1150
CAAACCAACC ACAGCCTCAG CCTCAGCCTC AACCGCAACC TCAACCCCTA 
1200
ACTCAGCCGC AACCGTCTGG TCAGACCGAT GGTCCCGACA AGATCATATT 
1250
GCAGTTTGGG AAAGTGGGAA AAGACATGTT CACGATGGAT TTCCGGTATC 
1300
CGCTCTCTGC GTTTCAGGCT TTCGCTATCT GTTTGAGCAG TTTCGACACA 
1350
AAACTTGCTT GCGAATAA
1400

>AT1G76900.2 longest ORF length:455
MSFRSIVRDV RDSIGSLSRR SFDFKLSSLN KEGGKSRGSV QDSHEEQLVV 
50
TIQETPWANL PPELLRDVIK RLEESESVWP ARRHVVACAS VCRSWRDMCK 
100
EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA 
150
LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT 
200
KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE 
250
LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI 
300
TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK 
350
NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL 
400
TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT 
450
KLACE
500