Locus |
Common name |
Short description |
AT1G77200 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G77200.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, PacI, PstI, SpeI
Name |
Recognition sequence |
Cut positions |
NcoI
| C|CATGG |
374 |
NotI
| GC|GGCCGC |
369 |
PvuII
| CAG|CTG |
251, 437 |
SacI
| GAGCT|C |
298 |
SalI
| G|TCGAC |
516 |
SmaI
| CCC|GGG |
120 |
StyI
| C|C[AT][AT]GG |
374, 628 |
XbaI
| T|CTAGA |
558 |
XhoI
| C|TCGAG |
459 |
Click here to view TAIR data
>AT1G77200.1 length:735
ATGACCGAGT CATCCATTAT CTCCGTCAAA CAATCGTCTC CGGTGCCGGA | 50 |
GGAGGAGGAT CATCATCATC ACCAACAAGA CTCCCACCGA ACCAACACCA | 100 |
AGAAACGTGT AAGATCCGAC CCGGGTTACC GAGGCGTCCG GATGCGAACG | 150 |
TGGGGCAAAT GGGTCTCCGA GATCCGAGAG CCTCGCAAGA AGAGCCGAAT | 200 |
CTGGCTAGGC ACTTTCTCCA CACCGGAAAT GGCGGCGCGT GCACATGACG | 250 |
CAGCTGCTCT CACCATTAAA GGAACTTCCG CCGTCCTCAA CTTCCCGGAG | 300 |
CTCGCCACTT ACCTTCCCCG TCCAGCTTCC TCCTCTCCAC GCGACGTTCA | 350 |
AGCCGCAGCC GCCGTAGCGG CCGCCATGGA CTTCTCCCCC TCCTCCTCCT | 400 |
CTCTCGTAGT CTCCGATCCA ACCACCGTCA TCGCCCCAGC TGAGACGCAG | 450 |
TTGTCTTCCT CGAGCTATTC AACGTGTACG TCATCGTCGT TGTCACCGTC | 500 |
AAGCGAAGAA GCTGCGTCGA CGGCGGAAGA ACTAAGCGAG ATAGTGGAGT | 550 |
TACCGAGTCT AGAGACGAGT TACGATGAGT CATTGAGCGA GTTTGTGTAC | 600 |
GTTGACTCGG CGTATCCACC TAGTTCGCCT TGGTATATTA ATAATTGTTA | 650 |
TAGCTTTTAT TACCACAGCG ACGAAAATGG CATTTCGATG GCTGAACCTT | 700 |
TCGACTCTTC CAATTTTGGC CCCCTTTTTC CTTAG | 750 |
>AT1G77200.1 longest ORF length:244
MTESSIISVK QSSPVPEEED HHHHQQDSHR TNTKKRVRSD PGYRGVRMRT | 50 |
WGKWVSEIRE PRKKSRIWLG TFSTPEMAAR AHDAAALTIK GTSAVLNFPE | 100 |
LATYLPRPAS SSPRDVQAAA AVAAAMDFSP SSSSLVVSDP TTVIAPAETQ | 150 |
LSSSSYSTCT SSSLSPSSEE AASTAEELSE IVELPSLETS YDESLSEFVY | 200 |
VDSAYPPSSP WYINNCYSFY YHSDENGISM AEPFDSSNFG PLFP | 250 |
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