Locus |
Common name |
Short description |
AT1G77640 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G77640.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, SacI, SalI, SmaI, SpeI, StyI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BamHI
| G|GATCC |
588 |
BglII
| A|GATCT |
620 |
PvuII
| CAG|CTG |
230, 482 |
Click here to view TAIR data
>AT1G77640.1 length:735
ATGGTGAAAC AAGAACTCAA GATCCAAGTT ACTACTTCCT CATCATCACT | 50 |
CTCTCATTCT TCATCTTCTT CTTCTTCTTC AACGTCGGCA CTACGTCATC | 100 |
AATCTTGTAA GAACAAGATA AAGAAGTATA AAGGTGTGAG GATGCGAAGT | 150 |
TGGGGATCAT GGGTTACTGA AATTAGGGCA CCAAATCAAA AGACAAGAAT | 200 |
CTGGTTAGGT TCTTACTCCA CCGCAGAAGC AGCTGCTAGG GCTTACGACG | 250 |
CTGCTCTCTT GTGTCTTAAG GGACCTAAAG CTAATCTCAA CTTCCCTAAC | 300 |
ATCACCACTA CTTCTCCTTT TCTTATGAAC ATCGACGAAA AGACCCTTTT | 350 |
GTCCCCAAAA TCAATCCAAA AGGTCGCCGC TCAAGCCGCT AACTCCTCTT | 400 |
CTGACCATTT TACCCCTCCG TCCGATGAAA ATGATCATGA TCATGATGAC | 450 |
GGACTCGATC ACCATCCATC TGCTTCTTCT TCAGCTGCAT CTTCACCACC | 500 |
AGATGATGAT CATCATAATG ATGACGATGG TGATTTGGTA TCGTTGATGG | 550 |
AATCTTTCGT GGATTACAAC GAACACGTGT CTCTGATGGA TCCATCGCTG | 600 |
TATGAATTTG GACATAATGA GATCTTCTTC ACCAACGGAG ATCCGTTTGA | 650 |
TTATTCTCCA CAGTTACATA GCTCAGAGGC AACGATGGAT GACTTCTACG | 700 |
ACGATGTTGA TATTCCGCTA TGGAGTTTCA GTTAA | 750 |
>AT1G77640.1 longest ORF length:244
MVKQELKIQV TTSSSSLSHS SSSSSSSTSA LRHQSCKNKI KKYKGVRMRS | 50 |
WGSWVTEIRA PNQKTRIWLG SYSTAEAAAR AYDAALLCLK GPKANLNFPN | 100 |
ITTTSPFLMN IDEKTLLSPK SIQKVAAQAA NSSSDHFTPP SDENDHDHDD | 150 |
GLDHHPSASS SAASSPPDDD HHNDDDGDLV SLMESFVDYN EHVSLMDPSL | 200 |
YEFGHNEIFF TNGDPFDYSP QLHSSEATMD DFYDDVDIPL WSFS | 250 |
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