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| Locus | Common name | Short description |
| AT1G78600 | BBX22, DBB3, STH3, LZF1 | SALT TOLERANCE HOMOLOG 3, DOUBLE B-BOX 3, B-box domain protein 22, light-regulated zinc finger protein 1 (.1.2) |
>AT1G78600.1 CDS map
>>Show genomic map
Uncut enzymes: AatII, Acc65I, AccII(FnuDII), AfeI, AflII, AflIII, AhdI, AlwI, Aor51HI(Eco47III), ApaI, ApaLI, AscI, AseI, AvaI, AvrII, BaeI, BalI, BamHI, BanI, BanII, BbsI, BbvCI, BbvI, BcgI, BciVI, BlpI, BmrI, BpmI, BsaAI, BsaHI, BsaI, BsaXI, BseRI, BsgI, BsiEI, BsiHKAI, BsiWI, BsmAI, BsmBI, BsmFI, BsmI, BsoBI, Bsp1286I, BspDI, BspHI, BspMI, BspT107I(HgiCI), BsrBI, BsrDI, BsrGI, BssHII, BssSI, BstAPI, BstBI, BstEII, BstF5I, BstNI, BstUI, BstXI, BstZ17I, Bsu36I, BtrI, BtsI, ClaI, DraI, DrdI, EaeI, EagI, EarI, EciI, EcoNI, EcoO109I, EcoRI, EcoRV, FauI, FokI, FseI, FspI, HaeII, HgaI, HincII, HpaI, HphI, I-CeuI, I-SceI, KasI, KpnI, MboII, MfeI, MluI, MlyI, MnlI, MscI, MseI, MslI, MspA1I, NaeI, , NarI, NdeI, NgoMIV, NheI, NotI, NruI, NsiI, NspI, PI-PspI, PI-SceI(VDE), PacI, PaeR7I, PciI, PflFI, PflMI, PleI, PmeI, PmlI, PpuMI, PsiI, PspGI, PspOMI, PvuI, PvuII, RsaI, RsrII, SacI, SacII, SalI, SapI, SbfI, ScaI, SexAI, SfaNI, SfiI, SfoI, SgrAI, SmaI, SmlI, SnaBI, SphI, SspI, StuI, SwaI, TliI, Tth111I, XbaI, XcmI, XhoI, XmaI, XmnI
| Name | Recognition sequence | Cut positions |
| AccI | GT|[AC][TG]AC | 647 |
| AccIII(BspMII) | T|CCGGA | 822 |
| AciI | C|CGC | 99 |
| AclI | AA|CGTT | 16 |
| AgeI | A|CCGGT | 850 |
| AluI | AG|CT | 217, 274, 510, 599 |
| AlwNI | CAGNNN|CTG | 773 |
| ApoI | Pu|AATTPy | 92 |
| AvaII | G|G[AT]CC | 333 |
| BclI | T|GATCA | 495, 594 |
| BfaI | C|TAG | 642, 895 |
| BglI | GCCNNNN|NGGC | 60 |
| BglII | A|GATCT | 682 |
| BsaBI | GATNN|NNATC | 434 |
| BsaJI | C|CNNGG | 374 |
| BsaWI | [AT]|CCGG[AT] | 822, 850 |
| BslI | CCNNNNN|NNGG | 849 |
| BspEI | T|CCGGA | 822 |
| BsrFI | Pu|CCGGPy | 850 |
| BsrI | ACTGGN| | 298, 331, 541, 785 |
| BssKI | |CCNGG | 477 |
| BstYI | Pu|GATCPy | 682 |
| BtgI | C|CPuPyGG | 374 |
| Cac8I | GCN|NGC | 79 |
| Cfr10I | [AG]|CCGG[TC] | 850 |
| DdeI | C|TNAG | 406, 553, 631, 790 |
| DpnI | GA-CH3|TC | 428, 494, 531, 593, 624, 681 |
| DpnII | |GATC | 428, 494, 531, 593, 624, 681 |
| DraIII | CACNNN|GTG | 256, 811 |
| Fnu4HI | GC|NGC | 27, 63, 99, 446, 884 |
| HaeIII | GG|CC | 421, 786 |
| HhaI | GCG|C | 51 |
| HinP1I | G|CGC | 51 |
| HindIII | A|AGCTT | 511 |
| HinfI | G|ANTC | 5, 130, 193, 260, 301, 318, 657, 752, 863 |
| HpaII | C|CGG | 114, 476, 821, 849 |
| Hpy188I | TCN|GA | 125, 497, 596, 660 |
| Hpy99I | CG[AT]CG| | 37, 56, 888 |
| HpyCH4III | ACN|GT | 39, 255, 664, 890 |
| HpyCH4IV | A|CGT | 15 |
| HpyCH4V | TG|CA | 207, 244, 685 |
| MboI | |GATC | 428, 494, 531, 593, 624, 681 |
| MspI | C|CGG | 114, 476, 821, 849 |
| MwoI | GCNNNNN|NNGC | 33, 60, 458 |
| N.BstNBI | GAGTCNNNN|N | 135 |
| NciI | CC|[CG]GG | 477 |
| NcoI | C|CATGG | 374 |
| NlaIII | CATG| | 266, 373, 610, 735 |
| NlaIV | GGN|NCC | 744 |
| PshAI | GACNN|NNGTC | 176, 332 |
| PstI | CTGCA|G | 686 |
| Sau3AI | |GATC | 428, 494, 531, 593, 624, 681 |
| Sau96I | G|GNCC | 333 |
| ScrFI | CC|NGG | 477 |
| SfcI | C|TPuPyAG | 323, 686, 767 |
| SpeI | A|CTAGT | 643 |
| StyI | C|C[AT][AT]GG | 374 |
| Taqƒ¿I | T|CGA | 426, 503, 671 |
| TfiI | G|A[AT]TC | 5, 193, 260, 301, 318, 657, 752, 863 |
| TseI | G|C[AT]GC | 63, 446 |
| Tsp45I | |GT[CG]AC | 169 |
| Tsp509I | |AATT | 91 |
| TspRI | NNCA[CG]TGNN| | 11, 256, 298, 331, 557 |
Click here to view TAIR data
>AT1G78600.1 length:900
ATGAAGATTC AGTGTAACGT TTGTGAGGCG GCGGAAGCGA CGGTTCTATG | 50 |
TTGCGCCGAC GAGGCTGCTC TTTGTTGGGC TTGCGATGAG AAAATTCACG | 100 |
CCGCTAATAA ACTCGCCGGA AAACATCAGA GAGTCCCTCT CTCTGCCTCT | 150 |
GCCTCTTCCA TACCCAAATG TGACATTTGT CAGGAAGCAT CTGGATTCTT | 200 |
CTTTTGTCTG CAAGATAGAG CTTTGCTATG TAGGAAATGT GATGTTGCAA | 250 |
TCCACACTGT GAATCCTCAT GTTTCAGCTC ACCAGAGATT TCTTCTCACT | 300 |
GGAATCAAAG TTGGTCTTGA ATCTATAGAC ACTGGTCCTT CTACTAAATC | 350 |
CTCACCTACC AATGATGATA AAACCATGGA GACCAAACCT TTTGTTCAAT | 400 |
CTATACCTGA GCCTCAAAAG ATGGCCTTCG ATCATCATCA TCACCAGCAG | 450 |
CAGCAGGAAC AGCAGGAAGG AGTTATACCG GGAACTAAAG TCAATGATCA | 500 |
GACATCGACA AAGCTTCCTC TCGTAAGTAG CGGATCAACT ACTGGAAGCA | 550 |
TTCCTCAGTG GCAAATAGAG GAGATTTTCG GGCTAACCGA CTTTGATCAG | 600 |
AGCTATGAAT ACATGGAGAA TAATGGATCA TCTAAGGCGG ATACTAGTAG | 650 |
ACGAGGAGAT TCAGACAGTT CTTCGATGAT GAGATCTGCA GAAGAAGATG | 700 |
GAGAAGATAA CAATAACTGC TTGGGAGGTG AGACATCATG GGCGGTTCCA | 750 |
CAGATTCAGT CTCCACCTAC AGCGTCTGGT CTAAACTGGC CTAAGCATTT | 800 |
TCACCACCAC TCTGTGTTTG TTCCGGACAT AACTTCTTCA ACTCCTTATA | 850 |
CCGGTTCATC CCCGAATCAA AGGGTTGGGA AACGGCGGCG ACGGTTCTAG | 900 |
>AT1G78600.1 longest ORF length:299
MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS | 50 |
ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT | 100 |
GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ | 150 |
QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ | 200 |
SYEYMENNGS SKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP | 250 |
QIQSPPTASG LNWPKHFHHH SVFVPDITSS TPYTGSSPNQ RVGKRRRRF | 300 |