Locus |
Common name |
Short description |
AT1G78600 |
BBX22, DBB3, STH3, LZF1 |
SALT TOLERANCE HOMOLOG 3, DOUBLE B-BOX 3, B-box domain protein 22, light-regulated zinc finger protein 1 (.1.2) |
>AT1G78600.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
BglII
| A|GATCT |
682 |
HindIII
| A|AGCTT |
511 |
NcoI
| C|CATGG |
374 |
PstI
| CTGCA|G |
686 |
SpeI
| A|CTAGT |
643 |
StyI
| C|C[AT][AT]GG |
374 |
Click here to view TAIR data
>AT1G78600.1 length:900
ATGAAGATTC AGTGTAACGT TTGTGAGGCG GCGGAAGCGA CGGTTCTATG | 50 |
TTGCGCCGAC GAGGCTGCTC TTTGTTGGGC TTGCGATGAG AAAATTCACG | 100 |
CCGCTAATAA ACTCGCCGGA AAACATCAGA GAGTCCCTCT CTCTGCCTCT | 150 |
GCCTCTTCCA TACCCAAATG TGACATTTGT CAGGAAGCAT CTGGATTCTT | 200 |
CTTTTGTCTG CAAGATAGAG CTTTGCTATG TAGGAAATGT GATGTTGCAA | 250 |
TCCACACTGT GAATCCTCAT GTTTCAGCTC ACCAGAGATT TCTTCTCACT | 300 |
GGAATCAAAG TTGGTCTTGA ATCTATAGAC ACTGGTCCTT CTACTAAATC | 350 |
CTCACCTACC AATGATGATA AAACCATGGA GACCAAACCT TTTGTTCAAT | 400 |
CTATACCTGA GCCTCAAAAG ATGGCCTTCG ATCATCATCA TCACCAGCAG | 450 |
CAGCAGGAAC AGCAGGAAGG AGTTATACCG GGAACTAAAG TCAATGATCA | 500 |
GACATCGACA AAGCTTCCTC TCGTAAGTAG CGGATCAACT ACTGGAAGCA | 550 |
TTCCTCAGTG GCAAATAGAG GAGATTTTCG GGCTAACCGA CTTTGATCAG | 600 |
AGCTATGAAT ACATGGAGAA TAATGGATCA TCTAAGGCGG ATACTAGTAG | 650 |
ACGAGGAGAT TCAGACAGTT CTTCGATGAT GAGATCTGCA GAAGAAGATG | 700 |
GAGAAGATAA CAATAACTGC TTGGGAGGTG AGACATCATG GGCGGTTCCA | 750 |
CAGATTCAGT CTCCACCTAC AGCGTCTGGT CTAAACTGGC CTAAGCATTT | 800 |
TCACCACCAC TCTGTGTTTG TTCCGGACAT AACTTCTTCA ACTCCTTATA | 850 |
CCGGTTCATC CCCGAATCAA AGGGTTGGGA AACGGCGGCG ACGGTTCTAG | 900 |
>AT1G78600.1 longest ORF length:299
MKIQCNVCEA AEATVLCCAD EAALCWACDE KIHAANKLAG KHQRVPLSAS | 50 |
ASSIPKCDIC QEASGFFFCL QDRALLCRKC DVAIHTVNPH VSAHQRFLLT | 100 |
GIKVGLESID TGPSTKSSPT NDDKTMETKP FVQSIPEPQK MAFDHHHHQQ | 150 |
QQEQQEGVIP GTKVNDQTST KLPLVSSGST TGSIPQWQIE EIFGLTDFDQ | 200 |
SYEYMENNGS SKADTSRRGD SDSSSMMRSA EEDGEDNNNC LGGETSWAVP | 250 |
QIQSPPTASG LNWPKHFHHH SVFVPDITSS TPYTGSSPNQ RVGKRRRRF | 300 |
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