fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G79180 ATMYB63 myb domain protein 63 (.1)

>AT1G79180.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
BglII A|GATCT 118, 195
HindIII A|AGCTT 244, 566
NcoI C|CATGG 52
PstI CTGCA|G 371
SacI GAGCT|C 360, 868
StyI C|C[AT][AT]GG 52


Click here to view TAIR data

>AT1G79180.1 length:885
ATGGGGAAGG GAAGAGCACC TTGTTGTGAC AAGACCAAAG TGAAGAGAGG 
50
TCCATGGAGC CCAGAAGAAG ACATTAAACT CATCTCTTTC ATTCAAAAGT 
100
TTGGTCATGA GAACTGGAGA TCTCTCCCCA AACAATCTGG GCTATTGAGG 
150
TGTGGGAAGA GTTGTCGTCT AAGGTGGATT AACTATCTTA GGCCAGATCT 
200
GAAGCGTGGC AACTTCACTT CAGAGGAGGA AGAAACAATC ATTAAGCTTC 
250
ACCACAACTA TGGGAACAAG TGGTCGAAAA TCGCTTCTCA ACTTCCAGGT 
300
AGAACAGATA ACGAGATCAA GAATGTGTGG CACACTCATC TAAAGAAAAG 
350
ACTGGCTCAG AGCTCAGGAA CTGCAGATGA ACCGGCCTCG CCTTGTTCGA 
400
GTGATTCTGT TTCTCGTGGG AAAGATGATA AGTCATCTCA CGTAGAAGAT 
450
TCTTTGAACA GAGAGACTAA TCATAGGAAT GAGTTGTCTA CATCTATGTC 
500
TTCTGGGGGT TCCAACCAAC AAGATGATCC AAAGATAGAC GAACTCAGGT 
550
TTGAGTATAT AGAAGAAGCT TATAGCGAGT TTAACGACAT TATTATTCAA 
600
GAGGTAGACA AACCCGATCT GCTGGAGATA CCATTTGATT CAGATCCTGA 
650
CATTTGGAGT TTCTTAGATA CTTCAAACTC ATTTCAACAA TCCACTGCAA 
700
ATGAGAACAG CTCAGGCTCA AGAGCAACAA CAGAAGAAGA GTCTGATGAG 
750
GATGAGGTTA AGAAATGGTT CAAGCACCTA GAAAGCGAAC TCGGGTTAGA 
800
AGAAGACGAT AATCAACAAC AATACAAAGA AGAAGAATCA TCATCATCAT 
850
CACTCTTGAA GAACTACGAG CTCATGATAC ATTGA
900

>AT1G79180.1 longest ORF length:294
MGKGRAPCCD KTKVKRGPWS PEEDIKLISF IQKFGHENWR SLPKQSGLLR 
50
CGKSCRLRWI NYLRPDLKRG NFTSEEEETI IKLHHNYGNK WSKIASQLPG 
100
RTDNEIKNVW HTHLKKRLAQ SSGTADEPAS PCSSDSVSRG KDDKSSHVED 
150
SLNRETNHRN ELSTSMSSGG SNQQDDPKID ELRFEYIEEA YSEFNDIIIQ 
200
EVDKPDLLEI PFDSDPDIWS FLDTSNSFQQ STANENSSGS RATTEEESDE 
250
DEVKKWFKHL ESELGLEEDD NQQQYKEEES SSSSLLKNYE LMIH
300