Locus |
Common name |
Short description |
AT1G79430 |
WDY, APL |
WOODY, ALTERED PHLOEM DEVELOPMENT, Homeodomain-like superfamily protein (.1.2) |
>AT1G79430.1 CDS map
>>Show genomic map
Uncut enzymes: AscI, BamHI, EcoRV, HindIII, HpaI, KpnI, NdeI, NheI, NotI, PacI, PvuII, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name |
Recognition sequence |
Cut positions |
ApaI
| GGGCC|C |
408 |
BglII
| A|GATCT |
731 |
EcoRI
| G|AATTC |
677 |
NcoI
| C|CATGG |
131 |
PstI
| CTGCA|G |
542 |
StyI
| C|C[AT][AT]GG |
131, 805 |
Click here to view TAIR data
>AT1G79430.1 length:882
ATGAGAGTTA TGGGTGTGAA GGGTCTTACT CTTTACCACC TAAAGAGCCA | 50 |
TCTTCAGAAA TTCAGGCTTG GAAAGCAGCC GCACAAGGAG TACGGAGATC | 100 |
ACTCCACAAA GGAAGGTTCA AGAGCTTCTG CCATGGATAT TCAGCGCAAC | 150 |
GTAGCTTCTT CTTCTGGCAT GATGAGTCGC AACATGAATG AGATGCAAAT | 200 |
GGAAGTGCAG AGAAGGTTGC ATGAACAGCT AGAGGTGCAA AGACATCTGC | 250 |
AACTGAGGAT TGAAGCACAA GGAAAGTACA TGCAATCTAT CTTGGAGAGA | 300 |
GCTTGCCAAA CCCTAGCCGG TGAGAACATG GCAGCCGCCA CCGCAGCAGC | 350 |
CGCCGTCGGA GGAGGATACA AGGGTAATCT GGGAAGTTCG AGTCTTTCAG | 400 |
CAGCGGTGGG CCCACCTCCT CATCCTCTTA GTTTCCCGCC GTTTCAAGAC | 450 |
CTAAACATCT ATGGAAACAC AACCGACCAA GTCCTCGACC ATCACAACTT | 500 |
CCATCATCAA AACATAGAGA ACCATTTCAC GGGTAACAAT GCTGCAGACA | 550 |
CCAACATTTA CTTGGGGAAG AAGCGACCTA ATCCTAATTT TGGTAACGAT | 600 |
GTAAGGAAAG GACTATTGAT GTGGTCTGAT CAAGATCACG ATCTTTCCGC | 650 |
AAACCAATCG ATCGATGATG AGCATAGAAT TCAGATACAG ATGGCTACAC | 700 |
ATGTCTCCAC GGATTTGGAT TCTTTGTCGG AGATCTACGA AAGGAAATCA | 750 |
GGTTTATCAG GTGATGAAGG GAATAATGGT GGGAAATTAC TGGAAAGGCC | 800 |
ATCGCCTAGG AGATCACCAT TGAGTCCTAT GATGAACCCT AATGGTGGAT | 850 |
TAATACAAGG AAGAAACTCG CCATTTGGGT GA | 900 |
>AT1G79430.1 longest ORF length:293
MRVMGVKGLT LYHLKSHLQK FRLGKQPHKE YGDHSTKEGS RASAMDIQRN | 50 |
VASSSGMMSR NMNEMQMEVQ RRLHEQLEVQ RHLQLRIEAQ GKYMQSILER | 100 |
ACQTLAGENM AAATAAAAVG GGYKGNLGSS SLSAAVGPPP HPLSFPPFQD | 150 |
LNIYGNTTDQ VLDHHNFHHQ NIENHFTGNN AADTNIYLGK KRPNPNFGND | 200 |
VRKGLLMWSD QDHDLSANQS IDDEHRIQIQ MATHVSTDLD SLSEIYERKS | 250 |
GLSGDEGNNG GKLLERPSPR RSPLSPMMNP NGGLIQGRNS PFG | 300 |
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