fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G79580 ANAC033, SMB, NST6 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.1), NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.2), NAC (No Apical Meristem) domain transcriptional regulator superfamily protein (.3)

>AT1G79580.2 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HpaI, KpnI, NdeI, NheI, NotI, PacI, SacI, SalI, SmaI, SpeI, XbaI, XhoI
Name Recognition sequence Cut positions
HindIII A|AGCTT 901
NcoI C|CATGG 720
PstI CTGCA|G 764
PvuII CAG|CTG 761
StyI C|C[AT][AT]GG 175, 720


Click here to view TAIR data

>AT1G79580.2 length:1116
ATGGAGATAG GGTCGTCATC CACGGTGGCT GGCGGAGGAC AGCTTTCGGT 
50
GCCTCCGGGA TTCCGGTTTC ATCCAACGGA GGAGGAGCTT CTTTACTATT 
100
ACCTCAAGAA GAAGGTTTCT TATGAACCAA TTGATTTAGA TGTAATTAGA 
150
GAAGTTGATC TCAACAAGCT GGAACCTTGG GAACTTAAAG AGAAATGCAG 
200
AATCGGGTCG GGTCCTCAAA ACGAGTGGTA TTTCTTTAGC CACAAGGACA 
250
AGAAATATCC GACTGGGACC CGAACGAACC GGGCGACAGC AGCCGGGTTC 
300
TGGAAAGCTA CTGGTAGAGA CAAATCCATA CATCTCAACA GCTCCAAGAA 
350
GATTGGACTT CGTAAGACTC TTGTCTTCTA CACTGGTCGT GCTCCTCATG 
400
GCCAAAAAAC CGAATGGATC ATGCACGAAT ATCGCTTGGA CGATAGCGAA 
450
AACGAAATTC AGGAAGATGG GTGGGTTGTA TGCAGAGTGT TCAAGAAGAA 
500
GAATCATTTC AGAGGATTTC ACCAAGAACA AGAGCAAGAT CATCATCATC 
550
ATCACCAATA CATAAGCACC AACAATGATC ATGATCACCA TCATCACATT 
600
GACTCCAATT CAAACAATCA TTCTCCTTTG ATCCTACATC CTCTGGATCA 
650
TCATCACCAC CATCATCACA TTGGACGACA AATCCACATG CCATTACATG 
700
AGTTTGCAAA CACTCTGAGC CATGGCTCAA TGCATCTACC TCAGCTCTTT 
750
AGCCCTGACT CAGCTGCAGC GGCGGCTGCC GCAGCAGCAT CAGCCCAACC 
800
ATTTGTGTCG CCAATCAACA CTACGGACAT TGAATGTTCA CAGAATCTAC 
850
TGAGGTTGAC TTCTAACAAC AACTATGGTG GAGACTGGTC GTTTCTGGAC 
900
AAGCTTCTCA CTACAGGCAA CATGAATCAG CAACAGCAGC AGCAAGTGCA 
950
GAACCATCAA GCAAAATGTT TTGGTGACTT GAGTAACAAC GATAATAACG 
1000
ATCAGGCTGA TCATTTGGGT AACAACAATG GTGGTTCTTC TTCATCTCCA 
1050
GTTAATCAAA GGTTTCCGTT TCACTACTTG GGAAACGACG CTAATCTTCT 
1100
CAAGTTCCCA AAGTAG
1150

>AT1G79580.2 longest ORF length:371
MEIGSSSTVA GGGQLSVPPG FRFHPTEEEL LYYYLKKKVS YEPIDLDVIR 
50
EVDLNKLEPW ELKEKCRIGS GPQNEWYFFS HKDKKYPTGT RTNRATAAGF 
100
WKATGRDKSI HLNSSKKIGL RKTLVFYTGR APHGQKTEWI MHEYRLDDSE 
150
NEIQEDGWVV CRVFKKKNHF RGFHQEQEQD HHHHHQYIST NNDHDHHHHI 
200
DSNSNNHSPL ILHPLDHHHH HHHIGRQIHM PLHEFANTLS HGSMHLPQLF 
250
SPDSAAAAAA AAASAQPFVS PINTTDIECS QNLLRLTSNN NYGGDWSFLD 
300
KLLTTGNMNQ QQQQQVQNHQ AKCFGDLSNN DNNDQADHLG NNNGGSSSSP 
350
VNQRFPFHYL GNDANLLKFP K
400