fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G80010 FRS8 FAR1-related sequence 8 (.1)

>AT1G80010.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, EcoRV, HindIII, HpaI, NdeI, NheI, NotI, PacI, PstI, SalI, SmaI, SpeI, XbaI
Name Recognition sequence Cut positions
BglII A|GATCT 1145
EcoRI G|AATTC 1540
KpnI GGTAC|C 1886
NcoI C|CATGG 1035
PvuII CAG|CTG 97
SacI GAGCT|C 349, 799
StyI C|C[AT][AT]GG 435, 1035, 1201
XhoI C|TCGAG 926


Click here to view TAIR data

>AT1G80010.1 length:2178
ATGATCGGTA ATAGCGTCTA CATCTCACCG TCACCGTCAC CGTCCGACCA 
50
CTCTCTCTCG CCCAACCCTA ATCTCTGCAT CTCGGCGATG GAAGAGCAGC 
100
TGGTTGTTGA TGATGATGAT GATGACCTTG CTCCTCCTCC AATCCCTGAT 
150
CTCGATATTG ACCTTGAAGA TGATGATGAC GCCTGTTGTC ACGGCTTGCT 
200
TCATATCGCA CCTAATCACG AAGAAGAAAC TGGATGCGAC GAAAACGCTT 
250
TTGCTAATGA AAAGTGTTTG ATGGCTCCTC CTCCTACTCC TGGAATGGAG 
300
TTCGAGTCCT ACGATGATGC TTACAGTTTC TACAACTCAT ACGCCCGTGA 
350
GCTCGGTTTT GCTATCCGCG TCAAGTCCTC CTGGACTAAG CGTAACAGCA 
400
AGGAGAAACG TGGTGCTGTC TTGTGTTGCA ACTGCCAAGG TTTCAAGCTG 
450
CTTAAAGATG CTCACTCCCG GAGAAAGGAG ACCCGCACCG GCTGCCAGGC 
500
CATGATTCGC CTTCGACTCA TCCACTTTGA TCGATGGAAA GTTGATCAAG 
550
TCAAACTCGA CCACAACCAC TCCTTTGATC CTCAACGTGC CCACAATTCC 
600
AAGTCTCACA AGAAATCCTC CTCCTCAGCT TCTCCTGCAA CTAAGACAAA 
650
TCCCGAACCA CCTCCCCATG TCCAAGTCCG GACTATCAAA TTGTATCGAA 
700
CCCTTGCCCT TGACACACCA CCCGCTCTTG GAACTTCACT CTCTAGCGGG 
750
GAGACCAGCG ATCTCAGCCT TGATCACTTC CAATCTTCAA GGCGCTTGGA 
800
GCTCAGAGGG GGTTTCAGGG CCTTGCAGGA TTTCTTCTTC CAAATTCAGC 
850
TTTCCAGCCC CAACTTTCTT TACCTCATGG ACCTTGCCGA CGACGGGAGT 
900
CTCAGGAATG TCTTTTGGAT TGACGCTCGA GCTAGGGCTG CATACTCTCA 
950
CTTTGGCGAC GTTCTTCTGT TCGACACCAC TTGTTTATCT AACGCATACG 
1000
AGCTTCCCCT TGTGGCCTTT GTTGGAATTA ACCACCATGG AGATACAATC 
1050
TTGCTCGGCT GTGGTTTGCT TGCTGATCAG AGCTTTGAGA CCTATGTCTG 
1100
GCTCTTCAGA GCGTGGCTAA CCTGCATGTT AGGCCGTCCC CCACAGATCT 
1150
TTATCACGGA ACAGTGCAAG GCAATGCGGA CCGCTGTCTC TGAAGTTTTT 
1200
CCAAGGGCTC ATCATCGTCT TAGCTTGACC CACGTCCTGC ACAACATCTG 
1250
TCAGAGTGTT GTCCAACTAC AAGATTCTGA CTTGTTCCCT ATGGCACTTA 
1300
ACAGAGTAGT CTACGGTTGT CTCAAGGTCG AAGAATTTGA AACAGCTTGG 
1350
GAAGAGATGA TCATTCGCTT TGGGATGACA AATAACGAGA CCATCAGGGA 
1400
CATGTTTCAA GATCGAGAAC TCTGGGCTCC AGTTTACCTC AAGGATACAT 
1450
TTTTGGCCGG GGCGCTGACT TTTCCACTGG GAAATGTGGC AGCCCCGTTC 
1500
ATCTTCAGTG GCTATGTTCA TGAGAACACA TCCCTGAGAG AATTCCTTGA 
1550
AGGGTACGAA TCTTTTCTGG ATAAAAAGTA CACAAGAGAA GCCTTGTGCG 
1600
ACTCAGAGTC CTTAAAGTTG ATCCCCAAGC TCAAAACAAC GCACCCCTAC 
1650
GAGTCCCAGA TGGCAAAGGT CTTCACAATG GAGATATTTA GAAGGTTCCA 
1700
AGACGAGGTC TCAGCAATGT CTTCATGTTT TGGAGTAACG CAAGTCCACT 
1750
CAAACGGGTC GGCCTCCTCG TACGTAGTGA AAGAGAGGGA GGGAGACAAA 
1800
GTGAGAGACT TTGAGGTCAT CTACGAGACA AGTGCAGCAG CACAAGTACG 
1850
TTGCTTCTGT GTCTGTGGGG GTTTCAGCTT CAATGGGTAC CAATGCAGAC 
1900
ACGTGCTCCT CCTACTCAGC CACAACGGCT TGCAGGAAGT CCCGCCTCAG 
1950
TATATACTGC AACGGTGGCG GAAGGACGTG AAACGTCTCT ATGTGGCGGA 
2000
ATTTGGGTCA GGTCGTGTGG ACATAATGAA TCCGGATCAA TGGTATGAGC 
2050
ATTTGCACAG AAGAGCGATG CAGGTTGTTG AACAAGGGAT GAGATCGAAA 
2100
GAGCATTGCA GAGCTGCCTG GGAAGCGTTT AGAGAGTGTG CCAATAAGGT 
2150
CCAATTTGTG ACAGAGAAGC CTTCATAG
2200

>AT1G80010.1 longest ORF length:725
MIGNSVYISP SPSPSDHSLS PNPNLCISAM EEQLVVDDDD DDLAPPPIPD 
50
LDIDLEDDDD ACCHGLLHIA PNHEEETGCD ENAFANEKCL MAPPPTPGME 
100
FESYDDAYSF YNSYARELGF AIRVKSSWTK RNSKEKRGAV LCCNCQGFKL 
150
LKDAHSRRKE TRTGCQAMIR LRLIHFDRWK VDQVKLDHNH SFDPQRAHNS 
200
KSHKKSSSSA SPATKTNPEP PPHVQVRTIK LYRTLALDTP PALGTSLSSG 
250
ETSDLSLDHF QSSRRLELRG GFRALQDFFF QIQLSSPNFL YLMDLADDGS 
300
LRNVFWIDAR ARAAYSHFGD VLLFDTTCLS NAYELPLVAF VGINHHGDTI 
350
LLGCGLLADQ SFETYVWLFR AWLTCMLGRP PQIFITEQCK AMRTAVSEVF 
400
PRAHHRLSLT HVLHNICQSV VQLQDSDLFP MALNRVVYGC LKVEEFETAW 
450
EEMIIRFGMT NNETIRDMFQ DRELWAPVYL KDTFLAGALT FPLGNVAAPF 
500
IFSGYVHENT SLREFLEGYE SFLDKKYTRE ALCDSESLKL IPKLKTTHPY 
550
ESQMAKVFTM EIFRRFQDEV SAMSSCFGVT QVHSNGSASS YVVKEREGDK 
600
VRDFEVIYET SAAAQVRCFC VCGGFSFNGY QCRHVLLLLS HNGLQEVPPQ 
650
YILQRWRKDV KRLYVAEFGS GRVDIMNPDQ WYEHLHRRAM QVVEQGMRSK 
700
EHCRAAWEAF RECANKVQFV TEKPS
750