fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system

Locus Common name Short description
AT1G80390 IAA15 indole-3-acetic acid inducible 15 (.1)

>AT1G80390.1 CDS map

>>Show genomic map




Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, EcoRV, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, StyI
Name Recognition sequence Cut positions
XbaI T|CTAGA 348
XhoI C|TCGAG 136


Click here to view TAIR data

>AT1G80390.1 length:540
ATGTCACCGG AGGAATACGT TAGGGTTTGG CCGGATTCCG GTGATCTTGG 
50
AGGAACTGAG CTGACCCTAG CTTTGCCTGG CACTCCGACA AATGCATCGG 
100
AAGGTCCAAA AAAGTTCGGG AACAAACGTA GATTCCTCGA GACCGTTGAT 
150
TTAAAACTCG GGGAAGCACA CGAGAACAAT TATATCTCAA GCATGGTCAC 
200
TAATGACCAG TTGGTGGGCT GGCCGCCGGT AGCGACAGCG AGGAAAACAG 
250
TGAGGCGGAA ATACGTGAAA GTGGCGTTGG ATGGTGCGGC CTATCTCAGA 
300
AAGGTTGATC TTGGGATGTA CGATTGCTAT GGACAGCTTT TCACCGCTCT 
350
AGAAAACATG TTTCAGGGGA TAATAACAAT ATGTAGAGTG ACAGAGTTGG 
400
AGAGGAAGGG AGAGTTTGTT GCTACTTACG AGGATAAGGA CGGTGACTTG 
450
ATGTTAGTCG GAGATGTGCC GTGGATGATG TTTGTGGAAT CTTGCAAACG 
500
TATGAGGTTA ATGAAAACCG GAGATGCTAT TGGATTATAG 
550

>AT1G80390.1 longest ORF length:179
MSPEEYVRVW PDSGDLGGTE LTLALPGTPT NASEGPKKFG NKRRFLETVD 
50
LKLGEAHENN YISSMVTNDQ LVGWPPVATA RKTVRRKYVK VALDGAAYLR 
100
KVDLGMYDCY GQLFTALENM FQGIITICRV TELERKGEFV ATYEDKDGDL 
150
MLVGDVPWMM FVESCKRMRL MKTGDAIGL
200