Locus |
Common name |
Short description |
AT1G80580 |
|
Integrase-type DNA-binding superfamily protein (.1) |
>AT1G80580.1 CDS map
>>Show genomic map
Uncut enzymes: ApaI, AscI, BamHI, BglII, EcoRI, HindIII, HpaI, KpnI, NcoI, NdeI, NheI, NotI, PacI, PstI, PvuII, SacI, SalI, SmaI, SpeI, XhoI
Name |
Recognition sequence |
Cut positions |
EcoRV
| GAT|ATC |
157 |
StyI
| C|C[AT][AT]GG |
533 |
XbaI
| T|CTAGA |
729 |
Click here to view TAIR data
>AT1G80580.1 length:771
ATGGAAAACA GCTACACCGT TGATGGTCAC CGTCTTCAAT ATTCCGTTCC | 50 |
GTTAAGCTCC ATGCATGAAA CCAGTCAAAA CTCCGAAACT TACGGATTAT | 100 |
CCAAAGAGTC GCCGTTGGTC TGCATGCCCT TGTTCGAAAC CAACACTACT | 150 |
TCATTCGATA TCTCTTCTCT TTTCTCGTTT AACCCAAAAC CAGAACCCGA | 200 |
AAACACGCAT CGTGTCATGG ACGATTCCAT CGCCGCCGTC GTGGGCGAAA | 250 |
ACGTTCTTTT CGGTGATAAA AACAAAGTCT CTGATCACTT GACCAAAGAA | 300 |
GGTGGTGTGA AGCGGGGGCG GAAGATGCCG CAGAAGACCG GAGGATTCAT | 350 |
GGGAGTGAGA AAACGGCCGT GGGGGAGATG GTCGGCGGAG ATAAGAGACA | 400 |
GGATAGGGCG GTGCAGACAC TGGTTAGGAA CGTTCGACAC GGCGGAAGAG | 450 |
GCAGCGCGTG CGTATGACGC GGCGGCGAGG AGGCTTAGAG GGACCAAAGC | 500 |
CAAGACCAAT TTCGTGATTC CTCCGCTTTT TCCCAAGGAA ATAGCTCAGG | 550 |
CTCAGGAGGA TAATAGGATG AGGCAGAAGC AGAAGAAGAA GAAGAAGAAA | 600 |
AAAGTGAGTG TGAGGAAGTG TGTTAAAGTC ACATCGGTTG CACAGTTGTT | 650 |
CGATGATGCC AATTTTATAA ATTCTTCTAG TATTAAAGGA AATGTGATTA | 700 |
GTTCTATTGA TAATCTTGAA AAAATGGGTC TAGAGCTTGA TTTGAGTTTA | 750 |
GGGTTGTTGT CTAGGAAGTG A | 800 |
>AT1G80580.1 longest ORF length:256
MENSYTVDGH RLQYSVPLSS MHETSQNSET YGLSKESPLV CMPLFETNTT | 50 |
SFDISSLFSF NPKPEPENTH RVMDDSIAAV VGENVLFGDK NKVSDHLTKE | 100 |
GGVKRGRKMP QKTGGFMGVR KRPWGRWSAE IRDRIGRCRH WLGTFDTAEE | 150 |
AARAYDAAAR RLRGTKAKTN FVIPPLFPKE IAQAQEDNRM RQKQKKKKKK | 200 |
KVSVRKCVKV TSVAQLFDDA NFINSSSIKG NVISSIDNLE KMGLELDLSL | 250 |
GLLSRK | 300 |
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